Job Description P77258 Confidence 95.22% Date Thu Jan 5 12:26:56 GMT 2012 Rank 335 Aligned Residues 149 % Identity 13% Template c3fkkA_ PDB info PDB header:lyase Chain: A: PDB Molecule:l-2-keto-3-deoxyarabonate dehydratase; PDBTitle: structure of l-2-keto-3-deoxyarabonate dehydratase Resolution 2.10 Å

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	D	F	R	Q	A	I	A	N	A	R	E	A	G	F	D	L	V	E	L	H	S	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N	H	R	T	D	Q	Y	G	G	S	V	E	N	R	A	R	L	V	L	E	V	V	D	A	G	I	E	E	W	G	A	D	R	I	G	I	R	V	S	P	I	G	T
Query Conservation
Alig confidence																												.	.	.	.						.	.	.	.	.	.	.	.	.	.	.																					.	.	.							.	.	.	.	.
Template Conservation																												.	.	.	.						.	.	.	.	.	.	.	.	.	.	.																					.	.	.							.	.	.	.	.
Template Sequence		L	A	S	Q	K	R	A	V	D	F	M	I	D	A	G	S	D	G	L	C	I	L	A	N	F	S	.	.	.	.	E	Q	F	A	I	.	.	.	.	.	.	.	.	.	.	.	T	D	D	E	R	D	V	L	T	R	T	I	L	E	H	V	A	G	R	V	.	.	.	P	V	I	V	T	T	.	.	.	.	.
Template Known Secondary structure															T	T		S					S	S	G	G	G	.	.	.	.	T	G	G	G	S	.	.	.	.	.	.	.	.	.	.	.																	T	T	S	S	.	.	.							.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.						.	.	.	.	.	.	.	.	.	.	.																					.	.	.							.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.												70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.					.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300							.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																								.	.	.	.																							.	.	.	.	.	.
Query SS confidence																																								.	.	.	.																							.	.	.	.	.	.
Query Sequence		F	Q	N	T	D	N	G	P	N	E	E	A	D	A	L	Y	L	I	E	Q	L	G	K	R	G	I	A	Y	L	H	M	S	E	P	D	W	A	G	.	.	.	.	G	E	P	Y	T	D	A	F	R	E	K	V	R	A	R	F	H	G	P	I	I	G	.	.	.	.	.	.	A	G	A	Y	T	V	E	K	A	E
Query Conservation																																								.	.	.	.																							.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																	.	.	.	.																							.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	S	H	Y	S	T	Q	V	C	A	A	R	S	L	R	A	Q	Q	L	G	A	A	M	V	M	A	M	P	P	Y	H	G	A	T	F	R	V	P	E	A	Q	I	F	E	F	Y	A	R	V	S	D	A	I	A	I	P	I	M	V	Q	D	A	P	A	S	G	T	A	L	S	A	P	F	L	A
Template Known Secondary structure		.	.	.	.	.	.			S															T	T		S							S		B	T	T	T	B																			S	S								G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	I	G	K	G	L	I	D	A	V	A	F	G	R	D	W	I	A	N	P	D	L	V	A	R	L	Q	R
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		R	M	A	R	E	I	.	E	Q	V	A	Y	F	K	I	E	T	P	G	A	A	N	K	L	R	E	L	I	R
Template Known Secondary structure							S	.	T	T								S	T	T
Template Predicted Secondary structure								.
Template SS confidence
		170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions