Job Description P77258 Confidence 97.05% Date Thu Jan 5 12:26:56 GMT 2012 Rank 243 Aligned Residues 173 % Identity 14% Template c3fa4D_ PDB info PDB header:lyase Chain: D: PDB Molecule:2,3-dimethylmalate lyase; PDBTitle: crystal structure of 2,3-dimethylmalate lyase, a pep mutase/isocitrate2 lyase superfamily member, triclinic crystal form Resolution 2.18 Å

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		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	A	I	A	N	A	R	E	A	G	F	D	L	V	E	L	H	S	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N	H	R	T	D	Q	Y	G	G	S	V	E	N	R	A	R	L	V	L	E	V	V	D	A	G	I	E	E	W	G	A	D	R	I	G	I	R	V	S	P	I	G	T	F	Q	N	T
Query Conservation
Alig confidence																			.																				.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation																			.																				.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Sequence		G	L	S	A	R	V	A	L	S	A	G	F	D	A	L	Y	M	.	T	G	A	G	T	A	A	S	V	H	G	Q	A	D	L	G	I	C	T	.	.	.	.	.	.	.	.	.	.	L	N	D	M	R	A	N	A	E	M	I	S	N	I	S	P	S	T	P	V	I	A	D	A	D	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T	T		S					.										T	S	S		S	S	S				.	.	.	.	.	.	.	.	.	.															S	T	T	S							T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.																				.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.											.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.							.	.	.	.	.	300	.	.	.	.	.	.											.	.
Predicted Secondary structure																																																				.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Query Sequence		D	N	G	P	N	E	E	A	D	A	L	Y	L	I	E	Q	L	G	K	R	G	I	A	Y	L	H	M	S	E	P	D	W	A	G	G	E	P	Y	T	D	A	F	R	E	K	V	R	A	R	F	.	.	.	.	.	.	H	G	P	I	I	G	A	G	A	Y	T	V	.	.	.	.	.	.	.	.	.	.	E	K
Query Conservation																																																				.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																																		.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	T	G	Y	G	G	P	I	M	V	A	R	T	T	E	Q	Y	S	R	S	G	V	A	A	F	H	I	E	D	Q	V	Q	T	K	I	L	V	D	T	D	T	Y	V	T	R	I	R	A	A	V	Q	A	R	Q	R	I	G	S	D	I	V	V	I	A	R	T	D	S	L	Q	T	H	G	Y	E	E	S	V	A	R
Template Known Secondary structure		.	T		S	S	S														T	T									B						B																					T
Template Predicted Secondary structure		.
Template SS confidence
			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	T	L	I	G	K	G	L	I	D	A	V	A	F	G	R	D	W	I	A	N	P	D	L	V	A	R	L	Q	R	K	A	E	L	N	P	Q	R	A	E	S	F	Y	G	G	G	A	E	G	Y	T
Query Conservation
Alig confidence										.							.	.
Template Conservation										.							.	.
Template Sequence		L	R	A	A	R	D	A	G	.	A	D	V	G	F	L	.	.	E	G	I	T	S	R	E	M	A	R	Q	V	I	Q	D	L	A	G	W	P	L	L	L	N	M	V	E	H	G	A	T	P	S	I	S
Template Known Secondary structure									T	.		S					.	.	T	T														T	T	T	S		B						T	T	S	S	S
Template Predicted Secondary structure										.							.	.
Template SS confidence
		177	.	.	180	.	.	.	.		.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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