Job Description P77258 Confidence 84.71% Date Thu Jan 5 12:26:56 GMT 2012 Rank 457 Aligned Residues 140 % Identity 11% Template c3ewbX_ PDB info PDB header:transferase Chain: X: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of n-terminal domain of putative 2-2 isopropylmalate synthase from listeria monocytogenes Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	D	F	R	Q	A	I	A	N	A	R	E	A	G	F	D	L	V	E	L	H	S	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N	H	R	T	D	Q	Y	G	G	S	V	E	N	R	A	R	L	V	L	E	V	V	D	A	G	I	E	E	W	G	A	D	R	I	G	I	R	V	S	P	I	G	T
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Template Sequence		E	G	D	I	D	R	A	E	E	A	L	K	D	A	V	S	P	Q	I	H	I	.	.	.	.	.	.	.	.	.	.	F	L	A	T	S	D	V	H	X	E	Y	K	L	K	X	S	R	A	E	V	L	A	S	I	K	H	H	I	S	Y	A	R	Q	K	F	D	V	V	Q	F	S	P	E	D	A	.	.	.	.
Template Known Secondary structure													T	T		S	S						.	.	.	.	.	.	.	.	.	.					S							T	T																				T	T		S								T	G	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.											.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.					.	.	.	.	300	.	.					.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																																									.	.	.	.								.	.	.	.
Query SS confidence																																																									.	.	.	.								.	.	.	.
Query Sequence		F	Q	N	T	D	N	G	P	N	E	E	A	D	A	L	Y	L	I	E	Q	L	G	K	R	G	I	A	Y	L	H	M	S	E	P	D	W	A	G	G	E	P	Y	T	D	A	F	R	E	K	V	R	A	R	F	H	.	.	.	.	G	P	I	I	G	A	G	.	.	.	.	A	Y	T	V	E	K	A	E	T	L
Query Conservation																																																									.	.	.	.								.	.	.	.
Alig confidence		.	.	.	.	.	.																																																		.	.	.	.								.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	T	R	S	D	R	A	F	L	I	E	A	V	Q	T	A	I	D	A	G	A	T	V	I	N	I	P	D	T	V	G	Y	T	N	P	T	E	F	G	Q	L	F	Q	D	L	R	R	E	I	K	Q	F	D	D	I	I	F	A	S	H	C	H	D	D	L	G	X	A	T	A	N	A	L	A	A
Template Known Secondary structure		.	.	.	.	.	.	G	G	S															T	T									S	S	S																			T	T	G	G	G	S							B		T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	K	G	L	I	D	A	V
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		I	E	N	G	.	A	R	R	V
Template Known Secondary structure				T	T	.
Template Predicted Secondary structure						.
Template SS confidence
		217	.	.	220		.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions