Job Description P77258 Confidence 92.17% Date Thu Jan 5 12:26:56 GMT 2012 Rank 384 Aligned Residues 109 % Identity 11% Template c3d0cB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 oceanobacillus iheyensis at 1.9 a resolution Resolution 1.90 Å

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	F	R	Q	A	I	A	N	A	R	E	A	G	F	D	L	V	E	L	H	S	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N	H	R	T	D	Q	Y	G	G	S	V	E	N	R	A	R	L	V	L	E	V	V	D	A	G	I	E	E	W	G	A	D	R	I	G	I	R	V	S	P	I	G	T	F
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.							.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.							.	.	.	.	.	.
Template Sequence		K	G	L	D	D	N	V	E	F	L	L	Q	N	G	I	E	V	I	V	P	N	G	N	T	G	E	F	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	I	E	E	A	K	Q	V	A	T	R	V	T	E	L	V	N	G	R	A	.	.	.	T	V	V	A	G	I	.	.	.	.	.	.
Template Known Secondary structure														T	T						T	T	S	G	G	G	T	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																	T	T	S	S	.	.	.							.	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.							.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80				.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		Q	N	T	D	N	G	P	N	E	E	A	D	A	L	Y	L	I	E	Q	L	G	K	R	G	I	A	Y	L	H	M	S	E	P	D	W	A	G	.	G	E	P	Y	T	D	A	F	R	E	K	V	R	A	R	F	H	G	P	I	I	G
Query Conservation																																							.
Alig confidence		.	.	.	.	.	.																																.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	G	Y	S	V	D	T	A	I	E	L	G	K	S	A	I	D	S	G	A	D	C	V	X	I	H	Q	P	V	H	P	Y	I	T	D	A	G	A	V	E	Y	Y	R	N	I	I	E	A	L	D	A	P	S	I	I
Template Known Secondary structure		.	.	.	.	.	.		S	S														T	T		S										S																		S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions