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Job DescriptionP77258
Confidence77.77%DateThu Jan 5 12:26:56 GMT 2012
Rank488Aligned Residues139
% Identity13%Templatec3cc1B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:putative alpha-n-acetylgalactosaminidase; PDBTitle: crystal structure of a putative alpha-n-acetylgalactosaminidase2 (bh1870) from bacillus halodurans c-125 at 2.00 a resolution
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   58.60.........70.........80.........90.........100.........110.........120.........130.......
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Query Sequence  EATQISAQAKGYAGAPGIHSPEQIAAWKKITAGVHAENGHMAVQLWHTGRISHASLQPGGQAPVAPSALSAGTRTSLRDE
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Template Sequence  APLCXDEYGRLLPATNRFPSAKNGAGFKPLSDAIHDLGLKFGI. HIXRGIPRQAVYENSPVLGSTKTAREIAHTNSICPW
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B
TTS
B


TTT
GGGTTTTTTTT
.SST
B
TTSS
BTT

BTT
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   6970.........80.........90.........100.........110. ........120.........130.........140.......
 
   138.140.........150.........160.........170.........180.........190.........200.........210.......
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Query Sequence  NGQAIRVETSMPRALELEEIPGIVNDFRQAIANAREAGFDLVELHSAHGYLLHQFLSPSSNHRTDQYGGSVENRARLVLE
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Template Sequence  NTDXYGVDPTKEG. . . . . . . . . AQSYYNSLFELYAQWGVDFVKVDDIAAS. . . . . . . . . . . . . . . RLYDTHLEEIKXIQR
Template Known Secondary structure  B
S
TTSTT.........TT

S
S
B...............TTB


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   148.150.........160 .........170.........180........ .190.........200...
 
   218.220.
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Query Sequence  VVDA
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Template Sequence  AIQA
Template Known Secondary structure  T
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   204...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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