Job Description P77258 Confidence 94.78% Date Thu Jan 5 12:26:56 GMT 2012 Rank 344 Aligned Residues 147 % Identity 20% Template c3b4uB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from agrobacterium2 tumefaciens str. c58 Resolution 1.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		N	D	F	R	Q	A	I	A	N	A	R	E	A	G	F	D	L	V	E	L	H	S	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N	H	R	T	D	Q	Y	G	G	S	V	E	N	R	A	R	L	V	L	E	V	V	D	A	G	I	E	E	W	G	A	D	.	R	I	G	I	R	V	S	P	I	G	T
Query Conservation																																																																						.
Alig confidence																											.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.							.	.	.	.	.
Template Conservation																											.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Sequence		D	A	M	I	A	H	A	R	R	C	L	S	N	G	C	D	S	V	T	L	F	G	T	T	G	.	.	.	.	E	G	C	S	V	G	S	R	E	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	L	S	S	F	I	A	A	G	I	A	P	S	R	I	V	T	G	V	.	.	.	.	.
Template Known Secondary structure														T	T		S					S	S	T	T	T	.	.	.	.	T	G	G	G	S		T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T			G	G	G						.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.	.	.	.	.																60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.				.	.	.	.	300	.	.								.	.	.	.	.	.
Predicted Secondary structure																																									.	.																	.	.	.								.	.	.	.	.	.	.
Query SS confidence																																									.	.																	.	.	.								.	.	.	.	.	.	.
Query Sequence		F	Q	N	T	D	N	G	P	N	E	E	A	D	A	L	Y	L	I	E	Q	L	G	K	R	G	I	A	Y	L	H	M	S	E	P	D	W	A	G	G	.	.	E	P	Y	T	D	A	F	R	E	K	V	R	A	R	F	H	.	.	.	G	P	I	I	G	A	G	.	.	.	.	.	.	.	A	Y	T	V	E	K
Query Conservation																																									.	.																	.	.	.								.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																		.	.																	.	.	.								.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	L	V	D	S	I	E	D	A	A	D	Q	S	A	E	A	L	N	A	G	A	R	N	I	L	L	A	P	P	S	Y	F	K	N	V	S	D	D	G	L	F	A	W	F	S	A	V	F	S	K	I	G	K	D	A	R	D	I	L	V	Y	N	I	P	S	V	T	M	V	T	L	S	V	E	L
Template Known Secondary structure		.	.	.	.	.	.			S	S														T	T		S									S	S		S																			T	T														S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	T	L	I	G	K	G	L	I	D	A	V	A	F	G	R	D	W	I	A	N	P	D	L	V	A	R	L	Q	R
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		V	G	R	L	K	A	A	F	.	P	G	I	V	T	G	V	K	D	S	S	G	N	W	S	H	T	E	R	L	L	K
Template Known Secondary structure										.	T	T	T								S
Template Predicted Secondary structure										.
Template SS confidence
		154	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions