Job Description P77258 Confidence 89.80% Date Thu Jan 5 12:26:56 GMT 2012 Rank 415 Aligned Residues 130 % Identity 19% Template c2zyfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:homocitrate synthase; PDBTitle: crystal structure of homocitrate synthase from thermus thermophilus2 complexed with magnesuim ion and alpha-ketoglutarate Resolution 2.15 Å

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		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	A	I	A	N	A	R	E	A	G	F	D	L	V	E	L	H	S	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N	H	R	T	D	Q	Y	G	G	S	V	E	N	R	A	R	L	V	L	E	V	V	D	A	G	I	E	E	W	G	A	D	R	I	G	I	R	V	S	P	I	G	T	F	Q	N	T
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.																							.	.										.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.																							.	.										.	.	.	.	.
Template Sequence		L	D	A	A	K	V	A	V	E	T	G	V	Q	G	I	D	L	L	F	G	.	.	.	.	.	.	.	.	.	.	.	T	S	K	G	R	.	.	.	.	.	.	D	I	P	R	I	I	E	E	A	K	E	V	I	A	Y	I	R	E	A	A	P	H	.	.	V	E	V	R	F	S	A	E	D	.	.	.	.	.
Template Known Secondary structure											T	T		S								.	.	.	.	.	.	.	.	.	.	.	S					.	.	.	.	.	.																					T	T	.	.	S							S	S	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.																							.	.										.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.												.	.	.	100	.							.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.			.	.	.	.	.	300	.	.					.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.									.	.	.	.
Query SS confidence																																																				.	.									.	.	.	.
Query Sequence		D	N	G	P	N	E	E	A	D	A	L	Y	L	I	E	Q	L	G	K	R	G	I	A	Y	L	H	M	S	E	P	D	W	A	G	G	E	P	Y	T	D	A	F	R	E	K	V	R	A	R	F	.	.	H	G	P	I	I	G	A	G	.	.	.	.	A	Y	T	V	E	K	A	E	T	L	I	G	K	G	L	I
Query Conservation																																																				.	.									.	.	.	.
Alig confidence		.	.																																																	.	.									.	.	.	.															.
Template Conservation		.	.																																																																													.
Template Sequence		.	.	T	F	R	S	E	E	Q	D	L	L	A	V	Y	E	A	V	A	P	Y	V	D	R	V	G	L	A	D	T	V	G	V	A	T	P	R	Q	V	Y	A	L	V	R	E	V	R	R	V	V	G	P	R	V	D	I	E	F	H	G	H	N	D	T	G	C	A	I	A	N	A	Y	E	A	I	E	A	G	.	A
Template Known Secondary structure		.	.	T	T	T	S													G	G	G		S							T	T	S																			T	T	T	S							B		T	T	S												T	T	.
Template Predicted Secondary structure		.	.																																																																													.
Template SS confidence
				139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.
		319	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	H	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		216	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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