Job Description P77258 Confidence 98.67% Date Thu Jan 5 12:26:56 GMT 2012 Rank 70 Aligned Residues 137 % Identity 17% Template c2zrvC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:isopentenyl-diphosphate delta-isomerase; PDBTitle: crystal structure of sulfolobus shibatae isopentenyl2 diphosphate isomerase in complex with reduced fmn. Resolution 2.30 Å

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	Q	A	I	A	N	A	R	E	A	G	F	D	L	V	E	L	H	S	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N	H	R	T	D	Q	Y	G	G	S	V	E	N	R	A	R	L	V	L	E	V	V	D	A	G	I	E	E	W	G	A	D	R	I	G	I	R	V	S	P	I	G	T	F	Q	N
Query Conservation
Alig confidence																							.	.	.																	.	.	.	.	.	.	.	.	.	.														.										.	.	.	.	.	.	.
Template Conservation																							.	.	.																	.	.	.	.	.	.	.	.	.	.														.										.	.	.	.	.	.	.
Template Sequence		L	K	E	F	Q	D	A	I	Q	M	I	E	A	D	A	I	A	V	H	L	N	.	.	.	P	A	Q	E	V	F	Q	P	E	G	E	P	E	Y	Q	I	.	.	.	.	.	.	.	.	.	.	Y	A	L	E	K	L	R	D	I	S	K	E	L	.	S	V	P	I	I	V	K	E	S	.	.	.	.	.	.	.
Template Known Secondary structure												T	T		S								.	.	.							S	S	S							T	.	.	.	.	.	.	.	.	.	.														.	S	S							S	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.																	.	.	.	.	.	.	.	.	.	.														.										.	.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.				.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.											.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.																											.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	D	N	G	P	N	E	E	A	D	A	L	Y	L	I	E	Q	L	G	K	R	G	I	A	Y	L	H	M	S	E	P	D	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	G	E	P	Y	T	D	A	F	R	E	K	V	R	A	R	F	H	G	P
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.									.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.									.	.	.	.
Template Sequence		.	.	G	N	G	I	S	M	E	T	.	.	.	.	A	K	L	L	Y	S	Y	G	I	K	N	F	D	T	S	G	Q	G	G	T	N	W	I	A	I	E	M	I	R	D	I	R	R	G	N	W	K	A	E	S	A	K	N	F	L	D	W	G	V	P	T	A	A	S	I	M	E	V	R	Y	S	V	P	D	S	F
Template Known Secondary structure		.	.	S	S							.	.	.	.							T	T									B	T	S	B													T	T		T								T	T	T		S		B												S	T	T
Template Predicted Secondary structure		.	.									.	.	.	.
Template SS confidence
				196	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		298	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		I	I	G	A	G	A	Y	.	T	V	E	K	A	E	T	L	I	G	K	G	L	I	D	A	V	A	F	G	R	D	W	I
Query Conservation									.
Alig confidence									.													.
Template Conservation																						.
Template Sequence		L	V	G	S	G	G	I	R	S	G	L	D	A	A	K	A	I	A	L	G	.	A	D	I	A	G	M	A	L	P	V	L
Template Known Secondary structure						S	S			S											T	.		S
Template Predicted Secondary structure																						.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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