 |
Job Description | P77258 | Confidence | 98.13% | Date | Thu Jan 5 12:26:56 GMT 2012 |
Rank | 122 | Aligned Residues | 84 |
% Identity | 18% | Template | c2y85D_ |
PDB info |
PDB header:isomerase | Chain: D: PDB Molecule:phosphoribosyl isomerase a; |
PDBTitle: crystal structure of mycobacterium tuberculosis phosphoribosyl2 isomerase with bound rcdrp
|
Resolution | 2.40 Å |
|
 |
  |   |
255 | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | |
. | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Y | L | I | E | Q | L | G | K | R | G | I | A | Y | L | H | M | S | E | P | D | W | A | G | G | E | P | Y | T | D | A | F | R | E | K | V | R | A | R | F | H | G | P | I | I | G | A | G | A | Y | . |
T | V | E | K | A | E | T | L | I | G | K | G | L | I | D | A | V | A | F | G | R | D | W | I | A | N | P | D | L |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |
|
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|
|
|
|   |   |
|   |
| . |
|   |
|   |
|
|   |   |
|   |   |
|   |
|
|   |
|   |
|
|
|   |   |
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|
|
|   |
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |
| . |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | D | A | A | L | G | W | Q | R | D | G | A | E | W | I | H | L | V | D | L | D | A | A | F | G | R | G | S | N | H | E | L | L | A | E | V | V | G | K | L | D | V | Q | V | E | L | S | G | G | I | R | D | D | E | S | L | A | A | A | L | A | T | G | . |
C | A | R | V | N | V | G | T | A | A | L | E | N | P | Q | W |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  | S | S |
|
| S |  |  |  |  |  |  |  |  |  | T | T | . |
| S |  |  |  |  |
| G | G | G | G | G |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |
|
|  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
  |
  |   |
334 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
V | A | R | L | Q | R |
Query Conservation |   |
  |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
Template Sequence |   |
C | A | R | V | I | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
  |   |
114 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|