Job Description P77258 Confidence 94.94% Date Thu Jan 5 12:26:56 GMT 2012 Rank 341 Aligned Residues 133 % Identity 18% Template c2v9dB_ PDB info PDB header:lyase Chain: B: PDB Molecule:yage; PDBTitle: crystal structure of yage, a prophage protein belonging to2 the dihydrodipicolinic acid synthase family from e. coli3 k12 Resolution 2.15 Å

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	D	F	R	Q	A	I	A	N	A	R	E	A	G	F	D	L	V	E	L	H	S	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N	H	R	T	D	Q	Y	G	G	S	V	E	N	R	A	R	L	V	L	E	V	V	D	A	G	I	E	E	W	G	A	D	R	I	G	I	R	V	S	P	I	G	T
Query Conservation
Alig confidence																												.	.	.	.						.	.	.	.	.	.	.	.	.	.	.																					.	.	.							.	.	.	.	.
Template Conservation																												.	.	.	.						.	.	.	.	.	.	.	.	.	.	.																					.	.	.							.	.	.	.	.
Template Sequence		K	P	G	T	A	A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	L	G	S	G	G	.	.	.	.	E	F	S	Q	L	.	.	.	.	.	.	.	.	.	.	.	G	A	E	E	R	K	A	I	A	R	F	A	I	D	H	V	D	R	R	V	.	.	.	P	V	L	I	G	T	.	.	.	.	.
Template Known Secondary structure															T	T		S					S	S	T	T	T	.	.	.	.	T	G	G	G	S	.	.	.	.	.	.	.	.	.	.	.																	T	T	S	S	.	.	.							.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.						.	.	.	.	.	.	.	.	.	.	.																					.	.	.							.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.												.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.								.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																								.																									.	.	.	.	.	.	.
Query SS confidence																																								.																									.	.	.	.	.	.	.
Query Sequence		F	Q	N	T	D	N	G	P	N	E	E	A	D	A	L	Y	L	I	E	Q	L	G	K	R	G	I	A	Y	L	H	M	S	E	P	D	W	A	G	.	G	E	P	Y	T	D	A	F	R	E	K	V	R	A	R	F	H	G	P	I	I	G	A	G	.	.	.	.	.	.	.	A	Y	T	V	E	K	A	E	T	L
Query Conservation																																								.																									.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																	.																									.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	G	G	T	N	A	R	E	T	I	E	L	S	Q	H	A	Q	Q	A	G	A	D	G	I	V	V	I	N	P	Y	Y	W	K	V	S	E	A	N	L	I	R	Y	F	E	Q	V	A	D	S	V	T	L	P	V	X	L	Y	N	F	P	A	L	T	G	Q	D	L	T	P	A	L	V	K	T	L
Template Known Secondary structure		.	.	.	.	.	.		S	S																T		S								S	S	S																			S	S												S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		313	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	K	G	L	I	D	A	V	A	F
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		A	D	S	R	.	S	N	I	I	G	I
Template Known Secondary structure						.	T	T
Template Predicted Secondary structure						.
Template SS confidence
		164	.	.	.		.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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