|   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | |
. | . | . | . | . | . | . | . | . | 240 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | D | F | R | Q | A | I | A | N | A | R | E | A | G | F | D | L | V | E | L | H | S | A | H | G | Y | L | L | H | Q | F | L | S | P | S | S | N | H | R | T | D | Q | Y | G | G | S | V | E | N | R | A | R | L | V | L | E | V | V | D | A | G | I | E | E | W | G | A | D | R | . |
I | G | I | R | V | S | P | I | G | T |
Query Conservation |   |
  |   |
|   |   |
|
|   |
|
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|   |   |
|   |
|
|
|
|
|
|
|
|   |
|
|
|   |
|   |   |   |
|
|
|   |
|
|
|   |   |
|
|   |   |   | . |
|   |
|
|
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
  |   |   |
|   |   |   |
|   |   |
|   |
|
|
|
|   |
| . | . | . |
|
|
|   | . |
|   |   |   |   |   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|   |   |   |   |
|
|
|   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |
|
|
| . | . | . | . |
Template Sequence |   |
A | Y | L | T | S | E | L | K | K | Q | A | L | G | G | V | D | L | V | . |
. |
. |
D | D | E | I | . |
L | F | D | S | E | L | L | P | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | K | R | I | T | E | G | K | A | A | L | Q | E | V | Y | E | Q | T | G | K | R | T | L | Y | A | V | N | L | T | . |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | B |
| . | . | . |
|
| T | T | . |
|
|
|
| S | S | S |
|  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
| B |
|  |  |  |
|
| . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . | . | . |  |
|
|
| . |
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
| . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
155 | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | |
|
|
. | . | . | . | |
. | . | . | 180 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | |
|
|
|
  |
  |   |
241 | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
F | Q | N | T | D | N | G | P | N | E | E | A | D | A | L | Y | L | I | E | Q | L | G | K | R | G | I | A | Y | L | H | M | S | E | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|
|
|   |
|   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
. | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
. | . | . | . | . | . | . | . |   |   |   |   |   |
|   |   |
|
|   |   |
|   |
|   |
|
|   |   |   |
|
|   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|
|   |
|
|   |
|   |   |
|
|   |   |   |   |   |   |   |
|
|
|   |   |   |   |
|
|
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
G | K | T | F | A | L | K | D | K | A | K | R | A | A | E | L | G | A | D | V | L | L | F | N | V | F | A | Y | G | L | D | V | L | Q | A | L | R | E | D | E | E | I | A | V | P | I | M | A | H | P | A | F | S | G | A | V | T | P | S | E | F | Y | G | V | A | P | S | L | W | L | G | K |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | S |
| G | G | G |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
| G | G | G | S |
|  |  |  |  |  |  |  |  |  |
| T | T | T |
|
|
|  |  |  |
|
| T | T | G | G | G | T | S | S |
| S | S | S | S | B |
|  |  |  |  | T | T |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
216 | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
275 | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | |
. | . | . | . | . | . | . | . | 330 | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  | . |  |  |
|
|  |  |  |  |
|  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | W | A | G | G | E | P | Y | T | D | A | F | R | E | K | V | R | A | R | F | . |
. |
. |
. |
. |
. |
. |
. |
H | G | P | I | I | G | A | G | A | Y | T | V | E | K | A | E | T | L | I | G | K | G | L | I | D | A | V | . |
A | F | G | R | D | W | I | A | N | P | D |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
| . | . | . | . | . | . | . | . |   |
|
|
|
|   |   |
|   |
|
|   |
|   |
|
|   |   |
|   |   |
|   |
|
|   |
| . |   |
|
|
|   |   |
|
|
|
|   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
|   |   |   |
|   |
|
|   |   |   |   |   |   |
|   |
|
|
|
|   |   |
|
|
|
|   |
|
|
|
|
Template Sequence |   |
L | L | R | L | A | G | A | D | F | V | L | F | P | S | P | Y | G | S | V | A | L | E | R | E | Q | A | L | G | I | A | R | A | L | T | D | D | Q | E | P | F | A | R | A | F | P | V | P | S | A | G | I | H | P | G | L | V | P | L | I | I | R | D | F | G | L | D | T | I | V | N | A | G | G | G | I | H | G | H | P | D |
Template Known Secondary structure |   |
 |  |  |  |  | T |
| S |  |  |  |  |  |
| S | S | S | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S | S | S |
|
|
|  |  |  |  |  | S | S |
|
| G | G | G |  |  |  |  |  |  |  |  |
| S | S | S |  |  |  |  | S |  |  |  |  | T | S | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
288 | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . |
  |