Job Description P77258 Confidence 96.99% Date Thu Jan 5 12:26:56 GMT 2012 Rank 248 Aligned Residues 141 % Identity 13% Template c2cw6B_ PDB info PDB header:lyase Chain: B: PDB Molecule:hydroxymethylglutaryl-coa lyase, mitochondrial; PDBTitle: crystal structure of human hmg-coa lyase: insights into2 catalysis and the molecular basis for3 hydroxymethylglutaric aciduria Resolution 2.10 Å

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		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	I	A	N	A	R	E	A	G	F	D	L	V	E	L	H	S	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N	H	R	T	D	Q	Y	G	G	S	V	E	N	R	A	R	L	V	L	E	V	V	D	A	G	I	E	E	W	G	A	D	R	I	G	I	R	V	S	P	I	G	T	F	Q	N	T	D
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Template Sequence		K	G	F	E	A	A	V	A	A	G	A	K	E	V	V	I	.	.	.	.	.	.	.	.	.	.	F	G	A	A	S	E	L	F	T	K	K	N	I	N	C	S	I	E	E	S	F	Q	R	F	D	A	I	L	K	A	A	Q	S	A	.	.	.	.	N	I	S	V	R	G	Y	V	S	C	A	L	G	C	P	Y
Template Known Secondary structure										T	T		S					.	.	.	.	.	.	.	.	.	.				S									T	S	S		T	T	T															T	.	.	.	.	T									S	T	T		B	T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.											.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160					.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.					.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																																																			.									.	.	.	.
Query SS confidence																																																			.									.	.	.	.
Query Sequence		N	G	P	N	E	E	A	D	A	L	Y	L	I	E	Q	L	G	K	R	G	I	A	Y	L	H	M	S	E	P	D	W	A	G	G	E	P	Y	T	D	A	F	R	E	K	V	R	A	R	F	.	H	G	P	I	I	G	A	G	.	.	.	.	A	Y	T	V	E	K	A	E	T	L	I	G	K	G	L	I	D	A
Query Conservation																																																			.									.	.	.	.
Alig confidence																																																			.									.	.	.	.															.
Template Conservation																																																																														.
Template Sequence		E	G	K	I	S	P	A	K	V	A	E	V	T	K	K	F	Y	S	M	G	C	Y	E	I	S	L	G	D	T	I	G	V	G	T	P	G	I	M	K	D	M	L	S	A	V	M	Q	E	V	P	L	A	A	L	A	V	H	C	H	D	T	Y	G	Q	A	L	A	N	T	L	M	A	L	Q	M	G	.	V	S	V
Template Known Secondary structure		T	B	S																T	T		S							T	T																			S		G	G	G						B		T	T	S												T	T	.
Template Predicted Secondary structure																																																																														.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.
		321
Predicted Secondary structure
Query SS confidence
Query Sequence		V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		256

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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