 |
Job Description | P77258 | Confidence | 96.47% | Date | Thu Jan 5 12:26:56 GMT 2012 |
Rank | 274 | Aligned Residues | 79 |
% Identity | 16% | Template | c2agkA_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) |
PDBTitle: structure of s. cerevisiae his6 protein
|
Resolution | 1.30 Å |
|
 |
  |   |
255 | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | |
. | |
|
|
. | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
| . |
| . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Y | L | I | E | Q | L | G | K | R | G | I | A | Y | L | H | M | S | E | P | D | W | A | G | G | E | P | Y | T | D | A | F | R | E | K | V | R | A | R | F | H | G | P | I | I | G | A | G | A | Y | . |
T | . |
. |
. |
V | E | K | A | E | T | L | I | G | K | G | L | I | D | A | V | A | F | G | R | D | W | I | A | N |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |
|
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|
|
|
|   |   |
|   |
| . |
| . | . | . |   |
|   |
|
|   |   |
|   |   |
|   |
|
|   |
|   |
|
|
|   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |   |   |   |
|
|   |   |
|
|
|
|
|
|
| . | . | . | . | . |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |
|
|   |
|   |   |   |   |   |   |
| . |
|   |
|
|
|
|
|
|   |
|   |   |   |
Template Sequence |   |
S | Y | Y | A | K | L | Y | K | D | R | D | V | Q | G | C | H | V | I | K | L | G | . |
. |
. |
. |
. |
P | N | N | D | D | A | A | R | E | A | L | Q | E | S | P | Q | F | L | Q | V | G | G | G | I | N | D | T | N | C | L | E | W | L | K | W | A | S | K | V | I | . |
V | T | S | W | L | F | T | K | E | G | H | F | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
| T | T |
|  |  |  |  |  | S | . | . | . | . | . | S | S |
|  |  |  |  |  |  |  |  |  |  | S | T | T | T | S |  |  |  | S | S |
|
| T | T | T |  |  |  |  | T | T | T |
| S |
|  |  | . |  |
| G | G | G | B |
| T | T |
|
| B |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
. | . | . | . | . | . | . | 110 | . | . | . | . | . |
  |
  |   |
331 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | D | L | V | A | R | L | Q | R |
Query Conservation |   |
|   |
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   |   |
Template Sequence |   |
L | K | R | L | E | R | L | T | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
116 | . | . | . | 120 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|