Job Description P77258 Confidence 89.34% Date Thu Jan 5 12:26:56 GMT 2012 Rank 420 Aligned Residues 133 % Identity 11% Template c2a4aB_ PDB info PDB header:lyase Chain: B: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: deoxyribose-phosphate aldolase from p. yoelii Resolution 1.84 Å

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		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																								.	.	.
Query SS confidence																																																								.	.	.
Query Sequence		R	Q	A	I	A	N	A	R	E	A	G	F	D	L	V	E	L	H	S	A	H	G	Y	L	L	H	Q	F	L	S	P	S	S	N	H	R	T	D	Q	Y	G	G	S	V	E	N	R	A	R	L	V	L	E	V	.	.	.	V	D	A	G	I	E	E	W	G	A	D	R	I	G	I	R	V	S	P	I	G	T	F
Query Conservation																																																								.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	D	T	E	K	A	L	D	D	G	A	D	E	I	D	L	V	I	N	Y	K	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	N	T	D	E	G	L	K	E	A	T	K	L	T	Q	S	V	K	K	L	L	T	N	K	I	L	K	V	I	I	E	V	G	E	L	K
Template Known Secondary structure												T		S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S																			T	T	T	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.													.	.	.	.	.	300	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		Q	N	T	D	N	G	P	N	E	E	A	D	A	L	Y	L	I	E	Q	L	G	K	R	G	I	A	Y	L	H	M	S	E	P	D	W	A	G	G	E	P	Y	T	D	A	F	R	E	K	V	R	A	R	F	.	.	.	.	.	.	.	.	.	.	.	.	H	G	P	I	I	G	A	G	A	Y	.	T	V	E	K
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence			.	.	.	.	.	.	.	.																									.	.																			.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation			.	.	.	.	.	.	.	.																									.	.
Template Sequence		T	.	.	.	.	.	.	.	.	E	D	L	I	I	K	T	T	L	A	V	L	N	G	N	A	D	F	I	K	T	S	T	G	.	.	K	V	Q	I	N	A	T	P	S	S	V	E	Y	I	I	K	A	I	K	E	Y	I	K	N	N	P	E	K	N	N	K	I	G	L	K	V	S	G	G	I	S	D	L	N	T
Template Known Secondary structure		S	.	.	.	.	.	.	.	.													T	T	T		S							S	.	.		S	S																							G	G	G	T	T	T							S	S			S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.																									.	.
Template SS confidence
		151									.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		309	310	.	.	.	.				.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		A	E	T	L	I	G	.	.	.	K	G	L	I	D	A	V	A	F	G	R	D	W
Query Conservation								.	.	.
Alig confidence								.	.	.			.
Template Conservation													.
Template Sequence		A	S	H	Y	I	L	L	A	R	R	F	.	L	F	R	I	G	S	S	S	L	V
Template Known Secondary structure													.							S	S
Template Predicted Secondary structure													.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions