|   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | N | D | F | R | Q | A | I | A | N | A | R | E | A | G | F | D | L | V | E | L | H | S | A | H | G | Y | L | L | H | Q | F | L | S | P | S | S | N | H | R | T | D | Q | Y | G | G | S | V | E | N | R | A | R | L | V | L | E | V | V | D | A | G | I | E | E | W | G | A | D | R | I | G | I | R | V | S | P | I | G | T |
Query Conservation |   |
|   |   |
|   |   |
|
|   |
|
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|   |   |
|   |
|
|
|
|
|
|
|
|   |
|
|
|   |
|   |   |   |
|
|
|   |
|
|
|   |   |
|
|   |   |   |
|   |
|
|
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |
|
|
|
| . | . | . | . |
Template Sequence |   |
L | P | Q | L | L | K | Q | V | Q | L | A | V | E | K | G | Y | Q | R | V | K | L | K | I | R | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | Y | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | E | P | V | A | L | I | R | Q | H | F | P | N | L | P | L | M | V | D | A | N | . |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |
|  |  |  |  |
| B | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | B | S | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |
| T | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
| . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1143 | . | . | . | . | . | . | 1150 | . | . | . | . | . | . | . | . | . | 1160 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 1170 | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 1180 | . | . | . | . | . | . | . | . | . | 1190 | . | |
|
|
|
  |
  |   |
241 | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | |
. | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | Q | N | T | D | N | G | P | N | E | E | A | D | A | L | Y | L | I | E | Q | L | G | K | R | G | I | A | Y | L | H | M | S | E | P | D | W | A | G | G | E | P | Y | T | D | A | F | R | E | K | V | R | A | R | F | H | G | P | I | I | G | A | G | A | Y | . |
T | V | E | K | A | E | T | L | I | G | K | G | L | I | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|
|
|
|   |   |
|   |
| . |
|   |
|   |
|
|   |   |
|   |   |
|   |
|
|
Alig confidence |   |
. | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . |   |   |
|   |   |   |   |
|   |   |   | . |   |   |
|   |   |   |   |
|   |   |
|
|
|
|   |   |   | . | . | . | . | . | . |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
S | A | Y | T | L | A | D | L | P | Q | L | . |
Q | R | L | D | H | Y | Q | L | A | M | I | E | Q | P | F | A | A | . |
. |
. |
. |
. |
. |
D | D | F | L | D | H | A | Q | L | Q | R | E | L | K | T | R | I | C | L | D | E | N | I | R | S | L | K | D | C | Q | V | A | L | A | L | G | S | C | R |
Template Known Secondary structure |   |
. | . | . | . | . | . | T |
|
|
| G | G | G |  |  |  |  | . |  | G | G | G | G | S |
|
| S |
|  |  |
|
| S |
| T | . | . | . | . | . | . | T |
| S |  |  |  |  |  |  |  | T | T |
| S | S |
|  |  |  |
| T | T |
|
| S |  |  |  |  |  |  |  |  |  |  | T |
|
| S |
Template Predicted Secondary structure |   |
. | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  | . |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
| . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
1192 | . | . | . | . | . | . | . | 1200 | . | . | |
. | . | . | . | . | . | . | 1210 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
1220 | . | . | . | . | . | . | . | . | . | 1230 | . | . | . | . | . | . | . | . | . | 1240 | . | . | . | . | . | . | . | . | . | 1250 | . | . | . | . | . | . | . | . |
  |
  |   |
320 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
A | V | A | F |
Query Conservation |   |
  |
|   |
|
Alig confidence |   |
|
|
|
|
Template Conservation |   |
  |
|   |   |
Template Sequence |   |
S | I | N | L |
Template Known Secondary structure |   |
 |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
Template SS confidence |   |
|
|
|
|
  |   |
1259 | 1260 | . | . |
  |