Job Description P0AEP3 Confidence 99.85% Date Thu Jan 5 11:23:50 GMT 2012 Rank 46 Aligned Residues 200 % Identity 15% Template d2dpwa1 SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases TTHA0179-like Resolution 2.90

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	I	P	V	A	G	L	G	T	R	M	L	P	A	T	K	A	I	P	K	E	M	L	P	L	V	D	K	P	L	I	Q	Y	V	V	N	E	C	I	A	A	G	I	T	E	I	V	L	V	T	H	S	S	K	N	S	I	E	N	H	F	D	T	S	F	E	L	E	A	M	L	E	K	R	V	K	R	Q	L
Query Conservation
Alig confidence																		.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	I	V	L	A	G	G	K	E	A	W	A	E	R	F	G	.	V	G	S	K	A	L	V	P	Y	R	G	R	P	X	V	E	W	V	L	E	A	L	Y	A	A	G	L	S	P	V	Y	V	G	E	N	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									B		S	G	G	G	T	T	T	.		S	B	G	G	G	S			T	T			T											T	T							S			S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	E	V	Q	S	I	C	P	P	H	V	T	I	M	Q	V	R	Q	G	L	A	K	G	L	G	H	A	V	L	C	A	H	P	V	V	G	D	E	P	V	A	V	I	L	P	D	V	I	L	D	E	Y	E	S	D	L	S	Q	D	N	L	A	E	M	I	R	R	F	D	E	T	G	H	S	Q	I	M	V	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																											.																.	.	.	.	.	.													.
Template Conservation		.	.	.	.	.	.	.	.	.	.																											.																.	.	.	.	.	.													.
Template Sequence		.	.	.	.	.	.	.	.	.	.	L	V	P	A	P	A	L	T	L	P	D	R	G	G	L	L	E	N	L	E	Q	A	L	E	H	V	.	E	G	R	V	L	V	A	T	G	D	I	P	H	L	T	.	.	.	.	.	.	E	E	A	V	R	F	V	L	D	K	A	P	.	E	A	A	L	V	Y	P	I	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.		S	S			S							S	S											T		.		S							T	T		T	T			.	.	.	.	.	.													.	S		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																											.																.	.	.	.	.	.													.
Template SS confidence
												58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.							.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	A	D	V	T	A	Y	G	V	V	D	C	K	G	V	E	L	A	P	G	E	S	V	P	M	V	G	V	V	E	K	P	K	A	D	V	A	P	S	N	L	A	I	V	G	R	Y	V	L	S	A	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	K	E	A	V	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	P	R	T	K	R	T	Y	A	R	L	R	E	G	T	F	T	G	G	N	L	L	L	L	D	K	S	L	F	R	K	A	L	P	L	A	R	R	V	V	A	L	R	K	R	P	L	A	L	A	R	L	V	G
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T									T	T							S										T	T	T										T	T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.																			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		W	P	L	L	A	K	T	P	P	G	A	G	D	E	I	Q	L	T	D	A	I	D	M	L	I	E	K	E	.	T	V	E	A	Y	H	M	K	G	K	S	H	D	C	G	N	K	L	G	Y	M
Query Conservation																														.
Alig confidence																														.
Template Conservation
Template Sequence		W	D	V	L	L	K	L	L	L	G	R	L	S	L	A	E	V	E	A	R	A	Q	R	I	L	G	V	E	A	R	A	L	V	T	P	Y	P	E	V	G	V	D	V	D	R	E	E	D	L	V
Template Known Secondary structure											T																S	S								S		G	G	G	T					S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions