Job Description P0AEP3 Confidence 99.80% Date Thu Jan 5 11:23:50 GMT 2012 Rank 51 Aligned Residues 208 % Identity 15% Template d1w77a1 SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.00

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		I	N	T	K	V	K	K	A	V	I	P	V	A	G	L	G	T	R	M	L	P	A	T	K	A	I	P	K	E	M	L	P	L	V	D	K	P	L	I	Q	Y	V	V	N	E	C	I	A	A	G	.	I	T	E	I	V	L	V	T	H	S	S	K	N	S	I	E	N	H	F	D	T	S	F	E	L	E	A	M	L
Query Conservation																																																				.
Alig confidence								.								.	.	.	.	.	.	.	.	.	.																											.																										.	.	.	.
Template Conservation								.								.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.
Template Sequence		M	E	K	S	V	S	.	V	I	L	L	A	G	G	.	.	.	.	.	.	.	.	.	.	S	M	P	K	Q	Y	I	P	L	L	G	Q	P	I	A	L	Y	S	F	F	T	F	S	R	M	P	E	V	K	E	I	V	V	V	C	D	P	F	F	R	D	I	F	E	E	Y	E	E	S	I	D	V	.	.	.	.
Template Known Secondary structure			T	T				.								.	.	.	.	.	.	.	.	.	.				T	T	T	S			T	T													T		T	T										G	G	G	T					T	T	T	T	S		S	S	.	.	.	.
Template Predicted Secondary structure								.								.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.
Template SS confidence
		75	.	.	.	.	80		.	.	.	.	.	.	.											.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																															.	.
Query SS confidence																																															.	.
Query Sequence		E	K	R	V	K	R	Q	L	L	D	E	V	Q	S	I	C	P	P	H	V	T	I	M	Q	V	R	Q	G	L	A	K	G	L	G	H	A	V	L	C	A	H	P	V	V	G	.	.	D	E	P	V	A	V	I	L	P	D	V	I	L	D	E	Y	E	S	D	L	S	Q	D	N	L	A	E	M	I	R	R	F	D
Query Conservation																																															.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.												.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	R	F	A	I	P	G	K	E	R	Q	D	S	V	Y	S	G	L	Q	E	I	D	V	N	S	E	L	V	C	I	H	D	S	A	R	.	.	.	.	.	.	P	L	V	N	T	E	D	V	E	K	V	L	K	D	G	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	S											T	S		T	T		S							T	T		.	.	.	.	.	.	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template SS confidence
																								147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.							.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	G	H	S	Q	I	M	V	E	P	V	A	D	V	T	A	Y	G	V	V	D	C	K	G	V	E	L	A	P	G	E	S	V	P	M	V	G	V	V	E	K	P	K	A	D	V	A	P	S	N	L	A	I	V	G	R	Y	V	L	S	A	D	I	W	P	L	L	A	K	T	P	P	G	A	G	D	E	I	Q
Query Conservation
Alig confidence																			.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Template Conservation																			.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Template Sequence		A	V	G	A	A	V	L	G	V	P	A	K	A	T	I	K	E	.	.	.	.	.	V	N	S	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	V	T	L	W	E	M	Q	T	P	Q	V	I	K	P	E	L	L	K	K	G	F	E	L	V	K	S	E	.	.	G	L	E
Template Known Secondary structure				S										S					.	.	.	.	.	B		T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B																											S	.	.
Template Predicted Secondary structure																			.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.						.	.	.	.	220																				.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.			250	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	D	A	I	D	M	L	I	E	K	E	T	V	E	A	Y	H	M	K	G	K	S	H	D	C	G	N	K	L	G	Y	M	Q	A	F	V	E	Y	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	D	V	S	I	V	E	Y	L	K	H	P	V	Y	V	S	Q	G	S	Y	T	N	I	K	V	T	T	P	D	D	L	L	L	A	E	R	I	L	S
Template Known Secondary structure							T	T	G	G	G	S	S									T	T						S
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions