Job Description P0AEP3 Confidence 99.89% Date Thu Jan 5 11:23:50 GMT 2012 Rank 42 Aligned Residues 198 % Identity 16% Template d1w55a1 SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.3

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	K	K	A	V	I	P	V	A	G	L	G	T	R	M	L	P	A	T	K	A	I	P	K	E	M	L	P	L	V	D	K	P	L	I	Q	Y	V	V	N	E	C	I	A	A	G	I	T	E	I	V	L	V	T	H	S	S	K	N	S	I	E	N	H	F	D	T	S	F	E	L	E	A	M	L	E	K	R	V
Query Conservation
Alig confidence					.														.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.														.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	M	S	.	L	I	M	L	A	A	G	N	S	T	R	F	N	.	.	.	T	K	V	K	K	Q	F	L	R	L	G	N	D	P	L	W	L	Y	A	T	K	N	L	S	S	F	Y	P	F	K	K	I	V	V	T	S	S	N	I	T	Y	M	K	K	F	T	K	N	Y	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					.							S			T	T	T		.	.	.	S	S	S		G	G	G				B	T													T	T	S			S							S							T	T		S	S	S	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.														.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.		.	.	.	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	Q	L	L	D	E	V	Q	S	I	C	P	P	H	V	T	I	M	Q	V	R	Q	G	L	A	K	G	L	G	H	A	V	L	C	A	H	P	V	V	G	D	E	P	V	A	V	I	L	P	D	V	I	L	D	E	Y	E	S	D	L	S	Q	D	N	L	A	E	M	I	R	R	F	D	E	T	G	H	S	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.												.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.												.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	F	I	E	G	G	D	T	R	A	E	S	L	K	K	A	L	E	L	I	D	S	E	F	V	M	V	S	D	V	A	R	V	L	V	S	.	.	.	.	.	.	K	N	L	F	D	R	L	I	E	N	L	.	D	K	A	D	C	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S										T	T			S	S							T	T		T	T			.	.	.	.	.	.									T	T	G	.	G	G		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.												.
Template SS confidence
																						68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.							.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	V	E	P	V	A	D	V	T	A	Y	G	V	V	D	C	K	G	V	E	L	A	P	G	E	S	V	P	M	V	G	V	V	E	K	P	K	A	D	V	A	P	S	N	L	A	I	V	G	R	Y	V	L	S	A	D	I	W	P	L	L	A	K	T	P	P	G	A	G	D	E	I	Q	L	T	D	A	I	D
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Sequence		T	P	A	L	K	V	A	D	T	T	L	F	D	N	E	A	L	Q	R	.	.	.	.	.	.	.	.	.	E	K	I	K	L	I	Q	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	I	S	K	T	K	L	L	K	K	A	.	.	.	.	.	.	L	D	Q	N	L	E	F	T	D	D	S	T
Template Known Secondary structure									S					T	T					G	.	.	.	.	.	.	.	.	.	G	G						S		.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	T	S	S					S	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.										140	.	.	.	.	.	.	.	.															.	150	.	.	.	.	.	.	.	.	.							160	.	.	.	.	.	.	.	.	.	170	.
		247	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		M	L	I	E	K	E	.	T	V	E	A	Y	H	M	K	G	K	S	H	D	C	G	N	K	L	G	Y	M	Q	A
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		A	I	A	A	M	G	G	K	I	W	F	V	E	G	E	E	N	A	R	K	L	T	F	K	E	D	L	K	K	L
Template Known Secondary structure					T	T	T										G	G	G					S	G	G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions