Job Description P0AEP3 Confidence 99.90% Date Thu Jan 5 11:23:50 GMT 2012 Rank 41 Aligned Residues 212 % Identity 16% Template d1vpaa_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.67

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		I	N	T	K	V	K	K	A	V	I	P	V	A	G	L	G	T	R	M	L	P	A	T	K	A	I	P	K	E	M	L	P	L	V	D	K	P	L	I	Q	Y	V	V	N	E	C	I	A	A	G	I	T	E	I	V	L	V	T	H	S	S	K	.	.	N	S	I	E	N	H	F	D	T	S	F	E	L	E	A	M
Query Conservation																																																																.	.
Alig confidence					.	.	.	.													.	.	.																																									.	.										.	.	.	.	.	.	.
Template Conservation					.	.	.	.													.	.	.																																																				.	.	.	.	.	.	.
Template Sequence		M	N	V	.	.	.	.	A	I	L	L	A	A	G	K	G	E	R	M	.	.	.	S	E	N	V	P	K	Q	F	L	E	I	E	G	R	M	L	F	E	Y	P	L	S	T	F	L	K	S	E	A	I	D	G	V	V	I	V	T	R	R	E	W	F	E	V	V	E	K	R	V	F	H	.	.	.	.	.	.	.
Template Known Secondary structure					.	.	.	.										G	G	G	.	.	.			S	S		G	G	G				T	T			T	T											T	T		S								G	G	G						T	T				.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.													.	.	.																																																				.	.	.	.	.	.	.
Template SS confidence
		1	.	.					.	.	.	.	.	.	10	.	.	.	.	.				.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	K	R	V	K	R	Q	L	L	D	E	V	Q	S	I	C	P	P	H	V	T	I	M	Q	V	R	Q	G	L	A	K	G	L	G	H	A	V	L	C	A	H	P	V	V	G	D	E	P	V	A	V	I	L	P	D	V	I	L	D	E	Y	E	S	D	L	S	Q	D	N	L	A	E	M	I	R	R	F	D	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	V	L	G	I	V	E	G	G	D	T	R	S	Q	S	V	R	S	A	L	E	F	L	E	K	F	S	P	S	Y	V	L	V	H	D	S	A	R	P	F	L	R	.	.	.	.	.	.	K	K	H	V	S	E	V	L	R	R	A	R	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T									S	S													G	G	G			S							T	T	S					.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.
Template SS confidence
																				67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.							110	.	.	.	.	.	.	.	.	.	120	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	H	S	Q	I	M	V	E	P	V	A	D	V	T	A	Y	G	V	V	D	C	K	G	V	E	L	A	P	G	E	S	V	P	M	V	G	V	V	E	K	P	K	A	D	V	A	P	S	N	L	A	I	V	G	R	Y	V	L	S	A	D	I	W	P	L	L	A	K	T	P	P	G	A	G	D	E	I	Q	L
Query Conservation
Alig confidence												.	.	.	.	.												.	.	.	.	.	.	.	.									.	.	.	.	.	.	.																			.	.	.	.	.	.
Template Conservation												.	.	.	.	.												.	.	.	.	.	.	.	.									.	.	.	.	.	.	.																			.	.	.	.	.	.
Template Sequence		T	G	A	A	T	L	A	L	K	N	.	.	.	.	.	S	D	A	L	V	R	V	E	N	D	R	.	.	.	.	.	.	.	.	I	E	Y	I	P	R	K	G	.	.	.	.	.	.	.	V	Y	R	I	L	T	P	Q	A	F	S	Y	E	I	L	K	K	A	.	.	.	.	.	.	H	E	N	G	G	E	W
Template Known Secondary structure			S									.	.	.	.	.		S							T	T		.	.	.	.	.	.	.	.							T	T	.	.	.	.	.	.	.																			.	.	.	.	.	.		T	T
Template Predicted Secondary structure												.	.	.	.	.												.	.	.	.	.	.	.	.									.	.	.	.	.	.	.																			.	.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.									.	.	.	.	.	.	150	.								.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.							170	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		T	D	A	I	D	M	L	I	E	K	E	.	T	V	E	A	Y	H	M	K	G	K	S	H	D	C	G	N	K	L	G	Y	M	Q	A	F	V	E	Y
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		A	D	D	T	E	P	V	Q	K	L	G	V	K	I	A	L	V	E	G	D	P	L	C	F	K	V	T	F	K	E	D	L	E	L	A	R	I	I	A
Template Known Secondary structure		S	S	S						T	T	T										G	G	G					S	T	T
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions