Job Description P0AEP3 Confidence 99.78% Date Thu Jan 5 11:23:50 GMT 2012 Rank 54 Aligned Residues 201 % Identity 16% Template d1vgwa_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.35

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	K	V	K	K	A	V	I	P	V	A	G	L	G	T	R	M	L	P	A	T	K	A	I	P	K	E	M	L	P	L	V	D	K	P	L	I	Q	Y	V	V	N	E	C	I	A	A	G	I	T	E	I	V	L	V	T	H	S	S	K	N	S	I	E	N	H	F	D	T	S	F	E	L	E	A	M	L	E	K
Query Conservation
Alig confidence							.						.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.
Template Conservation							.						.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.
Template Sequence		K	R	K	N	I	.	A	L	I	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	K	Q	Y	V	E	I	G	S	K	T	V	L	E	H	V	L	G	I	F	E	R	H	E	A	V	D	L	T	V	V	V	V	S	P	E	D	T	F	A	D	K	V	Q	T	A	F	P	Q	.	.	.	.	.	.
Template Known Secondary structure							.						.	.	.	.	.	.	.	.	.	.	.	.	.				S					T	T													T		T	T										T	T		S	T									T	T	.	.	.	.	.	.
Template Predicted Secondary structure							.						.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.		.	.	.	10	.														.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.								.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.
Query Sequence		R	V	K	R	Q	L	L	D	E	V	Q	S	I	C	P	P	H	V	T	I	M	Q	V	R	Q	G	L	A	K	G	L	G	H	A	V	L	C	A	H	P	V	V	.	.	.	.	.	.	.	G	D	E	P	V	A	V	I	L	P	D	V	I	L	D	E	Y	E	S	D	L	S	Q	D	N	L	A	E	M	I	R
Query Conservation																																												.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.													.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	V	W	K	N	G	G	Q	T	R	A	E	T	V	R	N	G	V	A	K	L	L	E	T	G	L	A	A	E	T	D	N	I	L	V	H	D	A	A	R	.	.	.	.	.	.	C	C	L	P	S	E	A	L	A	R	L	I	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S								S	S																S	S	S		T	T	S							T	T		.	.	.	.	.	.	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Template SS confidence
																						72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.							.	.	.	.	.	.	.	120	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	D	E	T	G	H	S	Q	I	M	V	E	P	V	A	D	V	T	A	Y	G	V	V	D	C	K	G	V	E	L	A	P	G	E	S	V	P	M	V	G	V	V	E	K	P	K	A	D	V	A	P	S	N	L	A	I	V	G	R	Y	V	L	S	A	D	I	W	P	L	L	A	K	T	P	P	G	A	G	D
Query Conservation
Alig confidence																						.	.	.	.							.	.	.	.	.	.	.	.											.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.							.	.	.	.	.	.	.	.											.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Sequence		Q	A	G	N	A	A	E	G	G	I	L	A	V	P	V	A	D	T	L	K	.	.	.	.	R	A	E	S	G	Q	.	.	.	.	.	.	.	.	I	S	A	T	V	D	R	S	G	L	.	.	.	.	.	.	W	Q	A	Q	T	P	Q	L	F	Q	A	G	L	L	H	R	A	L	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T		T	T										S				.	.	.	.			S	S	S	S	.	.	.	.	.	.	.	.								T	T		.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.							.	.	.	.	.	.	.	.											.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.					.	.	.	.	150	.									.	.	.	.	.	.	.	.	160	.							.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		E	I	Q	L	T	D	A	I	D	M	L	I	E	K	E	.	T	V	E	A	Y	H	M	K	G	K	S	H	D	C	G	N	K	L	G	Y	M	Q	A	F	V
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		A	A	G	I	T	D	E	A	S	A	V	E	K	L	G	V	R	P	L	L	I	Q	G	D	A	R	N	L	K	L	T	Q	P	Q	D	A	Y	I	V	R	L
Template Known Secondary structure							S							T	T	T										T	T						S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions