Job Description P0AEP3 Confidence 99.86% Date Thu Jan 5 11:23:50 GMT 2012 Rank 45 Aligned Residues 218 % Identity 15% Template d1qwja_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	K	K	A	V	I	P	V	A	G	L	G	T	R	M	L	P	A	T	K	A	I	P	K	E	M	L	P	L	V	D	K	P	L	I	Q	Y	V	V	N	E	C	I	A	A	G	I	T	E	I	V	L	V	T	H	S	S	K	N	S	I	E	N	H	F	D	T	S	F	E	L	E	A	M	L	E	K	R	V
Query Conservation
Alig confidence					.														.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.
Template Conservation					.														.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.
Template Sequence		H	L	A	.	A	L	V	L	A	R	G	G	S	K	G	I	P	.	.	.	.	.	.	L	K	N	I	K	R	L	A	G	V	P	L	I	G	W	V	L	R	A	A	L	D	A	G	V	F	Q	S	V	W	V	S	T	D	H	D	E	I	E	N	V	A	K	Q	F	G	A	Q	V	.	.	.	.	.	.	.	.
Template Known Secondary structure					.							S			S	S	S	S	.	.	.	.	.	.		T	T	T	S			T	T															T			S							S											T	T				.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.														.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.
Template SS confidence
		42	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.							.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	Q	L	L	D	E	V	Q	S	I	C	P	P	H	V	T	I	M	Q	V	R	Q	G	L	A	K	G	L	G	H	A	V	L	C	A	H	P	V	V	G	D	E	P	V	A	V	I	L	P	D	V	I	L	D	E	Y	E	S	D	L	S	Q	D	N	L	A	E	M	I	R	R	F	D	E	T	G	H	S	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R	R	S	S	E	T	S	K	D	S	S	T	S	L	D	A	I	V	E	F	L	N	Y	H	N	E	V	D	I	V	G	N	I	Q	A	T	S	P	C	L	H	.	.	.	.	.	.	P	T	D	L	Q	K	V	A	E	M	I	R	E	E	G	Y	D	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	G	S	S	T	T												T	T		T	T		S							T	T		T	T			.	.	.	.	.	.													S	S			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.
Template SS confidence
																107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.							.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	V	E	P	V	A	D	V	T	A	Y	G	V	V	D	C	K	G	V	E	L	A	P	G	E	S	V	P	M	V	G	V	V	E	K	P	K	A	D	V	A	P	S	N	L	A	I	V	G	R	Y	V	L	S	A	D	I	W	P	L	L	A	K	T	P	P	G	A	G	D	E	I	Q	L	T	D	A	I	D
Query Conservation
Alig confidence																																								.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	F	S	V	V	R	R	H	Q	F	R	W	S	E	I	Q	K	G	V	R	E	V	T	E	P	L	N	L	N	P	A	K	R	P	R	R	Q	D	.	.	W	D	G	E	L	Y	E	N	G	S	F	Y	F	A	K	R	H	L	I	E	M	G	Y	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													B					S	S	T	T					B	S	S	S	B	T	T	B				T	T	T	.	.	S																				T	T		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		M	L	I	E	K	E	T	V	E	A	Y	H	M	K	G	.	K	S	H	D	C	G	N	K	L	G	Y	M	Q	A	F	V	E	Y	G
Query Conservation																	.
Alig confidence		.	.	.	.												.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	G	G	K	M	A	Y	Y	E	M	R	A	E	H	S	V	D	I	D	V	D	I	D	W	P	I	A	E	Q	R	V	L
Template Known Secondary structure		.	.	.	.		S	S								G	G	G									S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions