Job Description P0AEP3 Confidence 99.93% Date Thu Jan 5 11:23:50 GMT 2012 Rank 38 Aligned Residues 227 % Identity 13% Template d1h7ea_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 1.83

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	V	K	K	A	V	I	P	V	A	G	L	G	T	R	M	L	P	A	T	K	A	I	P	K	E	M	L	P	L	V	D	K	P	L	I	Q	Y	V	V	N	E	C	I	A	A	G	I	T	E	I	V	L	V	T	H	S	S	K	N	S	I	E	N	H	F	D	T	S	F	E	L	E	A	M	L	E	K	R
Query Conservation
Alig confidence						.														.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Template Conservation						.														.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Template Sequence		S	K	A	V	.	I	V	I	P	A	R	Y	G	S	S	R	L	P	.	.	.	.	.	.	G	K	P	L	L	D	I	V	G	K	P	M	I	Q	H	V	Y	E	R	A	L	Q	V	A	G	V	A	E	V	W	V	A	T	D	D	P	R	V	E	Q	A	V	Q	A	F	G	G	K	.	.	.	.	.	.	.	.
Template Known Secondary structure						.							S			S	S	S	T	.	.	.	.	.	.	T	G	G	G				T	T													T		T	T									S											T	T			.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.														.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.		.	.	.	.	.	10	.	.	.	.	.	.	.							.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	R	Q	L	L	D	E	V	Q	S	I	C	P	P	H	V	T	I	M	Q	V	R	Q	G	L	A	K	G	L	G	H	A	V	L	C	A	H	P	V	V	G	D	E	P	V	A	V	I	L	P	D	V	I	L	D	E	Y	E	S	D	L	S	Q	D	N	L	A	E	M	I	R	R	F	D	E	T	G	H	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	M	T	R	N	D	H	E	S	G	T	D	R	L	V	E	V	M	H	K	V	E	A	D	I	Y	I	N	L	Q	G	D	E	P	M	I	R	.	.	.	.	.	.	P	R	D	V	E	T	L	L	Q	G	M	R	D	D	P	A	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S			S	S												S			S							T	T		T	T			.	.	.	.	.	.															T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template SS confidence
																					66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.							.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		166	.	.	.	170								.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.																																						.	.	.	.
Query SS confidence							.	.	.	.	.	.	.																																						.	.	.	.
Query Sequence		Q	I	M	V	E	.	.	.	.	.	.	.	P	V	A	D	V	T	A	Y	G	V	V	D	C	K	G	V	E	L	A	P	G	E	S	V	P	M	V	G	V	V	E	K	P	K	A	D	V	.	.	.	.	A	P	S	N	L	A	I	V	G	R	Y	V	L	S	A	D	I	W	P	L	L	A	K	T	P	P	G
Query Conservation							.	.	.	.	.	.	.																																						.	.	.	.
Alig confidence							.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.
Template Sequence		P	V	A	T	L	C	H	A	I	S	A	A	E	A	A	E	P	S	T	V	K	V	V	V	N	T	R	Q	D	.	.	.	.	.	.	.	.	A	L	Y	F	S	R	S	P	I	P	Y	P	R	N	A	E	K	A	R	Y	L	K	H	V	G	I	Y	A	Y	R	R	D	V	L	Q	N	Y	S	Q	L	P	E	S
Template Known Secondary structure																T		T	T	S							T	T		B	.	.	.	.	.	.	.	.						S	S		S	S			T	T	G	G	G																				G	G	G	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.									150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	D	E	I	Q	L	T	D	A	I	D	M	L	I	E	K	E	T	V	E	A	Y	H	M	K	G	K	S	H	D	C	G	N	K	L	G	Y	M	Q	A	F	V	E	Y	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	P	E	Q	A	E	S	L	E	Q	L	R	L	M	N	A	G	I	N	I	R	T	F	E	V	A	A	T	G	P	G	V	D	T	P	A	C	L	E	K	V	R	A	L	M	A
Template Known Secondary structure								T		T	T						T	T															S	S	S
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions