Job Description P0AEP3 Confidence 100.00% Date Thu Jan 5 11:23:50 GMT 2012 Rank 5 Aligned Residues 234 % Identity 25% Template d1fxoa_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases glucose-1-phosphate thymidylyltransferase Resolution 1.66

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		K	K	A	V	I	P	V	A	G	L	G	T	R	M	L	P	A	T	K	A	I	P	K	E	M	L	P	L	V	D	K	P	L	I	Q	Y	V	V	N	E	C	I	A	A	G	I	T	E	I	V	L	V	T	H	S	.	S	K	N	S	I	E	N	H	F	D	T	S	F	E	L	E	A	M	L	E	K	R	V	K
Query Conservation																																																									.
Alig confidence																																																									.																.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		R	K	G	I	I	L	A	G	G	S	G	T	R	L	H	P	A	T	L	A	I	S	K	Q	L	L	P	V	Y	D	K	P	M	I	Y	Y	P	L	S	T	L	M	L	A	G	I	R	E	I	L	I	I	S	T	P	Q	D	T	P	R	F	Q	Q	L	L	G	D	G	S	N	W	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													T	T	T	T	T					S		G	G	G	S			T	T			T	T										T	T										T	T	T									T	T	S	G	G	G	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		R	Q	L	L	D	E	V	Q	S	I	C	P	P	H	V	T	I	M	Q	V	R	Q	G	L	A	K	G	L	G	H	A	V	L	C	A	H	P	V	V	G	D	E	P	V	A	V	I	L	P	D	V	I	L	D	E	Y	E	S	D	L	S	Q	D	N	L	A	E	M	I	R	R	F	.	D	E	T	G	H	S	Q
Query Conservation																																																																										.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.										.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	D	L	Q	Y	A	V	Q	P	S	P	D	G	L	A	Q	A	F	L	I	G	E	S	F	I	G	N	D	L	S	A	L	V	L	G	D	N	L	Y	Y	G	H	.	.	.	.	.	.	.	D	F	H	E	L	L	G	S	A	S	Q	R	Q	T	G	A	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	T									S	S				G	G	G					T					T	T	S							T	T						T	.	.	.	.	.	.	.	T										T			S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.
Template SS confidence
															74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.								.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	V	E	P	V	A	D	V	T	A	Y	G	V	V	D	C	K	G	V	E	L	A	P	G	E	S	V	P	M	V	G	V	V	E	K	P	K	A	D	V	A	P	S	N	L	A	I	V	G	R	Y	V	L	S	A	D	I	W	P	L	L	A	K	T	P	P	G	A	G	D	E	I	Q	L	T	D	A	I	D
Query Conservation
Alig confidence																							.	.	.	.	.	.	.											.	.
Template Conservation																							.	.	.	.	.	.	.											.	.
Template Sequence		V	F	A	Y	H	V	L	D	P	E	R	Y	G	V	V	E	F	D	Q	G	G	.	.	.	.	.	.	.	K	A	I	S	L	E	E	K	P	L	.	.	E	P	K	S	N	Y	A	V	T	G	L	Y	F	Y	D	Q	Q	V	V	D	I	A	R	D	L	K	P	S	P	R	G	E	L	E	I	T	D	V	N	R
Template Known Secondary structure								S		G	G	G	S							T	T	S	.	.	.	.	.	.	.								S		S	.	.	S		S	S	S											T	T												T	T	S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.											.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.								.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		M	L	I	E	K	E	T	V	E	A	Y	H	M	.	.	K	G	K	S	H	D	C	G	N	K	L	G	Y	M	Q	A	F	V	E	Y	G
Query Conservation															.	.
Alig confidence															.	.
Template Conservation
Template Sequence		A	Y	L	E	R	G	Q	L	S	V	E	I	M	G	R	G	Y	A	W	L	D	T	G	T	H	D	S	L	L	E	A	G	Q	F	I	A
Template Known Secondary structure						T	T									T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions