Job Description P0AEP3 Confidence 98.07% Date Thu Jan 5 11:23:50 GMT 2012 Rank 71 Aligned Residues 162 % Identity 15% Template c3ogzA_ PDB info PDB header:transferase Chain: A: PDB Molecule:udp-sugar pyrophosphorylase; PDBTitle: protein structure of usp from l. major in apo-form Resolution 2.03 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																													.	.	.																					.	.						.
Query SS confidence																													.	.	.																					.	.						.
Query Sequence		A	V	I	P	V	A	G	L	G	T	R	M	L	P	A	T	K	A	I	P	K	E	M	L	P	L	V	.	.	.	D	K	P	L	I	Q	Y	V	V	N	E	C	I	A	A	G	I	T	E	I	.	.	V	L	V	T	H	.	S	S	K	N	S	I	E	N	H	F	D	T	S	F	E	L	E	A	M	L	E	K
Query Conservation																													.	.	.																					.	.						.
Alig confidence															.	.	.												.	.	.																					.	.						.
Template Conservation															.	.	.
Template Sequence		F	V	L	V	A	G	G	L	G	E	R	L	G	.	.	.	Y	S	S	I	K	V	S	L	P	V	E	T	A	T	N	T	T	Y	L	A	Y	Y	L	R	W	A	Q	R	V	G	G	K	E	V	P	F	V	I	M	T	S	D	D	T	H	D	R	T	L	Q	L	L	R	E	L	Q	L	E	V	P	N	L	H	V
Template Known Secondary structure											G	G	G	T	.	.	.					G	G	G	S	B	S		T	T	T			B															T	T									T	T	T											T	T				T	T
Template Predicted Secondary structure															.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.													.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	K	R	Q	L	L	D	E	V	Q	S	I	C	P	P	H	V	T	I	M	Q	V	R	Q	G	L	A	K	G	L	G	H	A	V	L	C	A	H	P	V	V	.	.	.	.	.	.	.	.	.	.	.	.	G	D	E	P	V	A	V	I	L	P	D	V	I	L	D	E	Y	E	S	D	L	S	Q	D	N	L
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.
Template Sequence		L	K	Q	G	Q	V	F	C	F	A	D	S	A	A	H	L	A	L	D	E	T	G	K	L	L	R	K	P	H	G	H	G	D	V	H	S	L	I	Y	N	A	T	V	A	Q	P	L	V	N	D	W	L	A	A	G	Y	E	S	I	V	F	I	Q	D	T	N	.	.	.	.	.	.	A	G	A	T	I	T	I	P
Template Known Secondary structure										B	S	S	T	T			B		B		T	T	S	S	B							T	T										B				B								T	T									T	T	B	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																																																				.	.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.							260	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	M	I	R	R	F	D	E	T	G	H	S	Q	I	M	V	E	P	V	A	D	V	T	A	Y	G	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	L	A	L	S	A	E	H	S	L	D	M	N	F	T	C	I	P	R	V	P	K	E	P	I	G	L	L
Template Known Secondary structure										T	T		S										S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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