Job Description P0AEP3 Confidence 98.73% Date Thu Jan 5 11:23:50 GMT 2012 Rank 63 Aligned Residues 213 % Identity 14% Template c3oc9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:udp-n-acetylglucosamine pyrophosphorylase; PDBTitle: crystal structure of putative udp-n-acetylglucosamine2 pyrophosphorylase from entamoeba histolytica Resolution 1.80 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.														.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																													.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	I	P	V	A	G	L	G	T	R	M	L	P	A	T	K	A	I	P	K	E	M	L	P	L	V	.	.	.	D	K	P	L	I	Q	Y	V	V	N	E	C	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	I	T	E	I	V	L	V	T	H	S	S	K	N	S	I	E	N	H	F	D	T
Query Conservation																													.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.												.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.
Template Sequence		L	I	T	P	A	G	G	Q	G	S	R	L	G	.	.	.	F	E	H	P	K	G	M	F	V	L	P	F	E	I	P	K	S	I	F	Q	M	T	S	E	R	L	L	R	L	Q	E	L	A	S	E	Y	S	H	Q	K	N	V	M	I	H	W	F	L	M	T	N	E	E	T	I	E	E	I	N	N	Y	F	K	E
Template Known Secondary structure								S	B		T	T	T	T	.	.	.			S	B	G	G	G					S	S	S																										S												T	T	T
Template Predicted Secondary structure															.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		75	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.									.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.
Predicted Secondary structure														.	.																																								.	.	.	.	.	.	.	.														.
Query SS confidence														.	.																																								.	.	.	.	.	.	.	.														.
Query Sequence		S	F	E	L	E	A	M	L	E	K	R	V	.	.	K	R	Q	L	L	D	E	V	Q	S	I	C	P	P	H	V	T	I	M	Q	V	R	Q	G	L	A	K	G	L	G	H	A	V	L	C	A	H	P	V	.	.	.	.	.	.	.	.	V	G	D	E	P	V	A	V	I	L	P	D	V	.	I	L	D	E	Y
Query Conservation														.	.																																								.	.	.	.	.	.	.	.														.
Alig confidence														.	.																																								.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		H	Q	Y	F	G	L	S	S	E	Q	I	H	C	F	P	Q	G	M	L	P	V	V	D	F	N	G	K	I	L	Y	E	K	K	D	K	P	Y	M	A	P	N	G	H	G	G	L	F	K	A	L	K	D	N	G	I	L	E	F	M	N	E	K	G	I	K	Y	S	V	A	H	N	V	D	N	I	L	C	K	D	V
Template Known Secondary structure		T	G	G	G	G	S		T	T	S												B		T	T	S		B					T	T									G	G	G								T	T									T									T	T	B	T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		E	S	D	L	S	Q	D	N	L	A	E	M	I	R	R	F	D	E	T	G	H	S	Q	I	M	V	E	P	V	A	D	V	T	A	Y	G	V	V	D	C	K	G	V	E	L	A	P	G	E	S	V	P	M	V	G	V	V	E	K	P	K	A	D	V	A	.	P	S	N	L	A	I	V	G	R	Y	V	L	S	A
Query Conservation																																																																			.
Alig confidence												.	.	.	.	.	.																																																		.
Template Conservation												.	.	.	.	.	.
Template Sequence		D	P	N	M	I	G	Y	M	D	L	.	.	.	.	.	.	L	Q	S	E	I	C	I	K	I	V	K	K	G	F	K	E	E	K	V	G	V	L	V	K	E	Q	E	R	I	K	V	V	E	Y	T	E	L	T	D	E	L	N	K	Q	L	S	N	G	E	F	I	Y	N	C	G	H	I	S	I	N	G	Y	S	T
Template Known Secondary structure												.	.	.	.	.	.	T	T		S										S	T	T		S								T	T							G	G	G			T	T	T	T		B		T	T	S		B	S	S
Template Predicted Secondary structure												.	.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200							.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		223	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	W	P	L	L	A	K	T	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	F	L	E	K	A	A	E	Y	Q
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions