Job Description P0AEP3 Confidence 99.83% Date Thu Jan 5 11:23:50 GMT 2012 Rank 50 Aligned Residues 216 % Identity 14% Template c3f1cB_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative 2-c-methyl-d-erythritol 4-phosphate PDBTitle: crystal structure of 2-c-methyl-d-erythritol 4-phosphate2 cytidylyltransferase from listeria monocytogenes Resolution 2.30 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		A	V	I	P	V	A	G	L	G	T	R	M	L	P	A	T	K	A	I	P	K	E	M	L	P	L	V	D	K	P	L	I	Q	Y	V	V	N	E	C	I	A	A	G	I	T	E	I	V	L	V	T	H	S	S	K	.	.	N	S	I	E	N	H	F	D	T	S	F	E	L	E	A	M	L	E	K	R	V	K	R
Query Conservation																																																									.	.
Alig confidence														.	.	.	.	.	.	.																																					.	.														.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Q	I	L	A	G	M	G	N	V	S	M	.	.	.	.	.	.	.	P	K	Q	F	L	P	L	N	G	K	P	I	I	V	H	T	V	E	K	F	I	L	N	T	R	F	D	K	I	L	I	S	S	P	K	E	W	M	N	H	A	E	D	N	I	K	K	Y	I	S	D	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T	T	S		.	.	.	.	.	.	.		G	G	G	S			T	T													T		T	T		S								G	G	G															.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.								.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																									.	.	.
Query SS confidence																																									.	.	.
Query Sequence		Q	L	L	D	E	V	Q	S	I	C	P	P	H	V	T	I	M	Q	V	R	Q	G	L	A	K	G	L	G	H	A	V	L	C	A	H	P	V	V	G	.	.	.	D	E	P	V	A	V	I	L	P	D	V	I	L	D	E	Y	E	S	D	L	S	Q	D	N	L	A	E	M	I	R	R	F	D	E	T	G	H	S
Query Conservation																																									.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																													.	.	.																.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	D	R	I	V	V	I	E	G	G	E	D	R	N	E	T	I	M	N	G	I	R	F	V	E	K	T	Y	G	L	T	D	D	D	I	I	V	T	H	D	A	V	R	P	F	L	T	.	.	.	.	.	.	H	R	I	I	E	E	N	I	D	A	A	L	E	T	G	A	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	T	T								S	S																T				T	T								T	T		T	T			.	.	.	.	.	.														T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.
Template SS confidence
													72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.							.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	M	V	E	P	V	A	D	V	T	A	Y	G	V	V	D	C	K	G	V	E	L	A	P	G	E	S	V	P	M	V	G	V	V	E	K	P	K	A	D	V	A	P	S	N	L	A	I	V	G	R	Y	V	L	S	A	D	I	W	P	L	L	A	K	T	P	P	G	A	G	D	E	I	Q	L	T	D	A	I
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.																							.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.																							.	.
Template Sequence		D	T	V	I	.	.	.	.	.	.	.	.	.	.	.	.	E	A	L	D	T	I	V	E	S	S	N	H	E	V	I	T	D	I	P	V	R	D	H	M	.	.	.	.	.	Y	Q	G	Q	T	P	Q	S	F	N	M	K	K	V	F	N	H	Y	Q	N	L	T	.	.	P	E	K	K	Q	I	L	T	D	A	C
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.			S	S				B		S	S	S	S	S			B				G	G	G		.	.	.	.	.																				T	S		.	.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.																							.	.
Template SS confidence
		135	.	.	.													.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.						.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.
		246	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		D	M	L	I	E	K	E	.	T	V	E	A	Y	H	M	K	G	K	S	H	D	C	G	N	K	L	G	Y	M	Q	A	F	V	E	Y
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		K	I	C	L	L	A	G	D	D	V	K	L	V	K	G	E	I	F	N	I	K	I	T	T	P	Y	D	L	K	V	A	N	A	I	I
Template Known Secondary structure								T										T	T						S
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions