Job Description P0AEP3 Confidence 100.00% Date Thu Jan 5 11:23:50 GMT 2012 Rank 15 Aligned Residues 251 % Identity 16% Template c3brkX_ PDB info PDB header:transferase Chain: X: PDB Molecule:glucose-1-phosphate adenylyltransferase; PDBTitle: crystal structure of adp-glucose pyrophosphorylase from2 agrobacterium tumefaciens Resolution 2.10 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		I	N	T	K	V	K	K	A	V	I	P	V	A	G	L	G	T	R	M	L	P	A	T	K	A	I	P	K	E	M	L	P	L	V	D	K	P	.	L	I	Q	Y	V	V	N	E	C	I	A	A	G	I	T	E	I	V	L	V	T	H	S	S	K	N	S	I	E	N	H	F	D	T	S	F	E	L	E	A	M	L
Query Conservation																																							.
Alig confidence								.																															.																																							.	.	.	.
Template Conservation								.																																																																						.	.	.	.
Template Sequence		L	A	R	D	A	X	.	A	Y	V	L	A	G	G	R	G	S	R	L	K	E	L	T	D	R	R	A	K	P	A	V	Y	F	G	G	K	A	R	I	I	D	F	A	L	S	N	A	L	N	S	G	I	R	R	I	G	V	A	T	Q	Y	K	A	H	S	L	I	R	H	L	Q	R	G	W	D	F	.	.	.	.
Template Known Secondary structure		G	G	G	G			.										G	G	G	G	G	G	G	S	S	S		G	G	G	S			T	T	T			T											T	T										T	T												S			.	.	.	.
Template Predicted Secondary structure								.																																																																						.	.	.	.
Template SS confidence
		9	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.
Query SS confidence																																														.	.	.
Query Sequence		E	K	R	V	K	R	Q	L	L	D	E	V	Q	S	I	C	P	P	H	V	T	I	M	Q	V	R	Q	G	L	A	K	G	L	G	H	A	V	L	C	A	H	P	V	V	.	.	.	G	D	E	P	V	A	V	I	L	P	D	V	I	L	D	E	Y	E	S	D	L	S	Q	D	N	L	A	E	M	I	R	R	F
Query Conservation																																														.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.																												.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																																														.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	P	E	R	N	E	S	F	D	I	L	P	A	S	W	Y	E	G	T	A	D	A	V	Y	Q	N	I	D	I	I	E	P	Y	A	P	E	Y	X	V	I	L	A	G	D	H	I	Y	K	X	D	Y	E	Y	X	L	Q	Q	H	V	D	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G	T																				T	T										S							S	S					B		T										.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																																														.	.	.	.	.	.
Template SS confidence
															84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.						.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																.	.																																.	.	.	.	.
Query SS confidence																.	.																																.	.	.	.	.
Query Sequence		D	E	T	G	H	S	Q	I	M	V	E	P	V	A	.	.	D	V	T	A	Y	G	V	V	D	C	K	G	V	E	L	A	P	G	E	S	V	P	M	V	G	V	V	E	K	P	K	.	.	.	.	.	A	D	V	A	P	S	N	L	A	I	V	G	R	Y	V	L	S	A	D	I	W	P	L	L	A	K	T	P
Query Conservation																.	.																																.	.	.	.	.
Alig confidence		.														.	.															.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation		.																														.	.	.	.	.	.	.
Template Sequence		.	S	G	A	D	V	T	I	G	C	L	E	V	P	R	X	E	A	T	G	F	G	V	X	H	V	N	E	K	D	.	.	.	.	.	.	.	E	I	I	D	F	I	E	K	P	A	D	P	P	G	I	P	G	N	E	G	F	A	L	A	S	X	G	I	Y	V	F	H	T	K	F	L	X	E	A	V	R	R	D
Template Known Secondary structure		.	T	T		S										T	T	G	G	G	G	S							T	T	S	.	.	.	.	.	.	.	B							S		S	S				B	T	T	B	T	T																					T	S	S
Template Predicted Secondary structure		.																														.	.	.	.	.	.	.
Template SS confidence
			152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180								.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		233	.	.	.	.	.	.	240	.	.	.				.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		P	G	A	G	D	E	I	Q	L	T	D	.	.	.	A	I	D	M	L	I	E	K	E	T	V	E	A	Y	H	M	K	G	K	S	H	D	C	G	N	K	L	G	Y	M	Q	A	F	V	E	Y	G	I	R	H	N	T	L
Query Conservation													.	.	.
Alig confidence													.	.	.
Template Conservation
Template Sequence		A	A	D	I	I	P	Y	I	V	E	H	G	K	A	V	A	H	R	F	A	D	S	C	V	R	S	D	F	E	H	E	P	Y	W	R	D	V	G	T	I	D	A	Y	W	Q	A	N	I	D	L	T	D	V	V	P	D	L
Template Known Secondary structure						T	T						S											B				T	T		S	S								S											T	T	S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions