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Job DescriptionP0AEP3
Confidence98.50%DateThu Jan 5 11:23:50 GMT 2012
Rank66Aligned Residues212
% Identity14%Templatec2yqsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:udp-n-acetylglucosamine pyrophosphorylase; PDBTitle: crystal structure of uridine-diphospho-n-acetylglucosamine2 pyrophosphorylase from candida albicans, in the product-binding form
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30....... ..40.........50.. .......60.. .......70...
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Query Sequence  AVIPVAGLGTRMLPATKAIPKEMLPLV. . . DKPLIQYVVNECIAA. . . . . . . . . . . . . GITEIVLVTH. SSKNSIENHFD
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Template Sequence  VLLMAGGQGTRLG. . . SSAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPTRNATESFFI
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GGGT...
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   106...110........ .120.........130.........140.........150.........160.........170.........180..
 
   74.....80.........90.........100.........110 .........120..... ....130........ .140
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Query Sequence  TSFELEAMLEKRVKRQLLDEVQSICPPHVTIMQVRQG. . . . LAKGLGHAVLCAHPV. . . . . . . . VGDEPVAVILPDV. IL
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Template Sequence  ENNYFGLN. SHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMYCVDNCLV
Template Known Secondary structure  TGGGGS
.GGG


TTSSSB
TT


GGGTTT

TTBTT
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   183......190 .........200.........210.........220.........230.........240.........250.........260.
 
   141........150.........160.........170.........180.........190.........200........
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Query Sequence  DEYESDLSQDNLAEMIRRFDETGHSQIMVEPVADVTAYGVVDCKGVELAPGESVPMVGVVEKPKADVA. . . . . . . . . . . .
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Template Sequence  KVADPIFIGFAIAK. . . . . . KFDLATKVVRKRDANESVGLIVLDQDN. . . . . . . QKPCVIEYSEISQELANKKDPQDSSK
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TTT.......T
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TT
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   262.......270..... ....280.........290.........300.. .......310.........320........
 
   209210.........220.........230.........
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Query Sequence  . PSNLAIVGRYVLSADIWPLLAKTPPGAGDEI
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Template Sequence  LFLRAANIVNHYYSVEFLNKMIPKWISSQKYL
Template Known Secondary structure  SS
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   329330.........340.........350.........360
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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