Job Description P0AEP3 Confidence 100.00% Date Thu Jan 5 11:23:50 GMT 2012 Rank 29 Aligned Residues 229 % Identity 16% Template c2qh5B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:mannose-6-phosphate isomerase; PDBTitle: crystal structure of mannose-6-phosphate isomerase from helicobacter2 pylori Resolution 2.30 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		K	A	V	I	P	V	A	G	L	G	T	R	M	L	P	A	T	K	A	I	P	K	E	M	L	P	L	V	D	.	K	P	L	I	Q	Y	V	V	N	E	C	I	A	A	G	I	T	E	I	V	L	V	T	H	S	S	K	N	S	I	E	N	H	F	D	T	S	F	E	L	E	A	M	L	E	K	R	V	K	R
Query Conservation																															.
Alig confidence								.	.	.	.			.	.	.	.	.													.																																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.			.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	N	I	L	L	S	.	.	.	.	S	R	.	.	.	.	.	S	L	Y	P	K	Q	F	L	K	L	F	D	H	K	S	L	F	E	L	S	F	K	R	N	A	S	L	V	D	E	T	L	I	V	C	N	E	K	H	Y	F	L	A	L	E	E	I	K	N	E	I	K	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								.	.	.	.		T	.	.	.	.	.	T	T	S		G	G	G				S	S	S													T	T		S								G	G	G								T	T	T	T		S	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.	.	.	.			.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.					10	.						.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		Q	L	L	D	E	V	Q	S	I	C	P	P	H	V	T	I	M	Q	V	R	Q	G	L	A	K	G	L	G	H	A	V	L	C	A	H	P	V	V	G	.	D	E	P	V	A	V	I	L	P	D	V	I	L	D	E	Y	E	S	D	L	S	Q	D	N	L	A	E	M	I	R	R	F	D	E	T	G	H	S	Q	I
Query Conservation																																									.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																												.																.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																												.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	N	K	S	V	G	F	L	L	E	S	L	S	K	N	T	A	N	A	I	A	L	S	A	L	M	S	D	K	E	D	L	L	I	V	T	P	S	D	H	L	I	K	D	.	.	L	Q	A	Y	E	N	A	I	K	K	A	I	D	L	A	Q	K	G	F	L	V	T	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	S									S	S														T	S		T	T	S							S	S		B				.	.																T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																												.	.
Template SS confidence
														74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210							.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																													.	.	.	.	.	.														.
Query SS confidence																																													.	.	.	.	.	.														.
Query Sequence		M	V	E	P	V	A	D	V	T	A	Y	G	V	V	D	C	K	G	V	E	L	A	P	G	E	S	V	P	M	V	G	V	V	E	K	P	K	A	D	V	A	P	S	.	.	.	.	.	.	N	L	A	I	V	G	R	Y	V	L	S	A	D	.	I	W	P	L	L	A	K	T	P	P	G	A	G	D	E	I	Q
Query Conservation																																													.	.	.	.	.	.														.
Alig confidence																						.	.	.	.	.	.	.																	.	.	.	.	.	.														.											.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.																																															.	.	.	.	.	.
Template Sequence		G	V	S	I	D	K	P	N	T	E	F	G	Y	I	E	S	P	N	G	L	.	.	.	.	.	.	.	D	V	K	R	F	I	E	K	P	S	L	D	K	A	I	E	F	Q	K	S	G	G	F	Y	F	N	S	G	M	F	V	F	Q	A	G	V	F	L	D	E	L	K	K	H	A	P	.	.	.	.	.	.	T
Template Known Secondary structure						S	S			T	T	S						S	S	S	S	.	.	.	.	.	.	.	B		S				S	S																																							.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.																																															.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.								160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.							.
		241	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		L	T	D	A	I	D	M	L	I	E	K	E	.	T	V	E	A	Y	H	M	K	G	K	S	H	D	C	G	N	K	L	G	Y	M	Q	A	F	V	E	Y	G	I	R	H	N	T
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		I	L	K	G	C	E	R	A	F	E	S	L	E	N	A	Y	F	F	E	K	K	I	A	R	L	S	E	K	S	M	Q	D	L	E	D	M	S	I	D	I	A	L	M	Q	Q	S
Template Known Secondary structure												T							S	S												T	T	S									T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions