Job Description P0AEP3 Confidence 99.76% Date Thu Jan 5 11:23:50 GMT 2012 Rank 57 Aligned Residues 199 % Identity 17% Template c2px7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate PDBTitle: crystal structure of 2-c-methyl-d-erythritol 4-phosphate2 cytidylyltransferase from thermus thermophilus hb8 Resolution 2.20 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	K	K	A	V	I	P	V	A	G	L	G	T	R	M	L	P	A	T	K	A	I	P	K	E	M	L	P	L	V	D	K	P	L	I	Q	Y	V	V	N	E	C	I	A	A	G	I	T	E	I	V	L	V	T	H	S	S	K	N	S	I	E	N	H	F	D	T	S	F	E	L	E	A	M	L	E	K	R	V
Query Conservation
Alig confidence					.									.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.									.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	S	.	V	L	I	P	A	A	G	G	.	.	.	.	.	.	.	.	.	.	.	P	K	A	F	L	Q	V	G	G	R	T	L	L	E	W	T	L	A	A	F	R	D	A	A	E	V	L	V	A	L	P	P	G	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					.									.	.	.	.	.	.	.	.	.	.	.		G	G	G		B		S	S	S	B									T	T	T		S								T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.									.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.		.	.	.	.	.	10	.	.												.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	Q	L	L	D	E	V	Q	S	I	C	P	P	H	V	T	I	M	Q	V	R	Q	G	L	A	K	G	L	G	H	A	V	L	C	A	H	P	V	V	G	D	E	P	V	A	V	I	L	P	D	V	I	L	D	E	Y	E	S	D	L	S	Q	D	N	L	A	E	M	I	R	R	F	D	E	T	G	H	S	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	K	G	L	G	A	V	F	L	E	G	G	A	T	R	Q	A	S	V	A	R	L	L	E	A	A	S	L	P	L	V	L	V	H	D	V	A	R	P	F	V	S	.	.	.	.	.	.	R	G	L	V	A	R	V	L	E	A	A	Q	R	S	G	A	A	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.			T	T		S								S	S														S	S							T	T						.	.	.	.	.	.															S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.
Template SS confidence
															55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.							.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	V	E	P	V	A	D	V	T	A	Y	G	V	V	D	C	K	G	V	E	L	A	P	G	E	S	V	P	M	V	G	V	V	E	K	P	K	A	D	V	A	P	S	N	L	A	I	V	G	R	Y	V	L	S	A	D	I	W	P	L	L	A	K	T	P	P	G	A	G	D	E	I	Q	L	T	D	A	I	D
Query Conservation
Alig confidence												.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation												.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Sequence		P	V	L	P	V	P	D	T	L	M	.	.	.	.	.	A	P	E	G	E	A	Y	G	R	V	V	P	R	E	A	F	R	L	V	Q	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	F	F	T	A	L	L	R	E	A	H	A	Y	A	.	.	R	R	K	G	L	E	A	S	D	D	A	Q
Template Known Secondary structure								S				.	.	.	.	.				S	S	S							G	G	G						S		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.				T				S	S
Template Predicted Secondary structure												.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.						.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.															.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.
		247	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		M	L	I	E	K	E	.	T	V	E	A	Y	H	M	K	G	K	S	H	D	C	G	N	K	L	G	Y	M	Q	A	F	V	E	Y
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		L	V	Q	A	L	G	Y	P	V	A	L	V	E	G	E	A	T	A	F	K	I	T	H	P	Q	D	L	V	L	A	E	A	L	A
Template Known Secondary structure						T	T										T	T						S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions