Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEP3
Confidence14.27%DateThu Jan 5 11:23:50 GMT 2012
Rank97Aligned Residues98
% Identity12%Templatec2jlaD_
PDB info PDB header:transferaseChain: D: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene PDBTitle: crystal structure of e.coli mend, 2-succinyl-5-enolpyruvyl-2 6-hydroxy-3-cyclohexadiene-1-carboxylate synthase - semet3 protein
Resolution2.81 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.. .......80.........90.........100.........110.....
Predicted Secondary structure 







..





















Query SS confidence 


































. .










































Query Sequence  DKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHF. . DTSFELEAMLEKRVKRQLLDEVQSICPPHVTIMQVRQGLAKGL
Query Conservation 





  
  
  


  
 

       
    ..                               
  
 
    

Alig confidence 


































..










































Template Conservation      
  
   
   

  


 

     
   
     
  
    
  
   
 



 

   
   
 


  
 
Template Sequence  NRRWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAENSAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANL
Template Known Secondary structure  TTT




STT
TT

S

S

SSTT
Template Predicted Secondary structure 





















Template SS confidence 















































































   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   116...120.........130.......
Predicted Secondary structure 






Query SS confidence 





















Query Sequence  GHAVLCAHPVVGDEPVAVILPD
Query Conservation 
 

  
      
  

   
Alig confidence 









..









Template Conservation     
  
   ..  


 


 
Template Sequence  YPALIEAGLT. . GEKLILLTAD
Template Known Secondary structure  ..


Template Predicted Secondary structure  ..




Template SS confidence 





















   87..90...... ...100......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions