Job Description P0AEP3 Confidence 58.65% Date Thu Jan 5 11:23:50 GMT 2012 Rank 78 Aligned Residues 198 % Identity 14% Template c2d7iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 10; PDBTitle: crsytal structure of pp-galnac-t10 with udp, galnac and mn2+ Resolution 2.50 Å

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		34	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure									.	.																.	.	.	.
Query SS confidence									.	.																.	.	.	.
Query Sequence		L	P	L	V	D	K	P	.	.	L	I	Q	Y	V	V	N	E	C	I	A	A	G	I	T	.	.	.	.	E	I	V	L	V	T	H	S	S	K	N	S	I	E	N	H	F	D	T	S	F	E	L	E	A	M	L	E	K	R	V	K	R	Q	L	L	D	E	V	Q	S	I	C	P	P	H	V	T	I	M	Q	V
Query Conservation									.	.																.	.	.	.
Alig confidence									.	.																.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	P	F	H	N	E	G	W	S	S	L	L	R	T	V	H	S	V	L	N	R	S	P	P	E	L	V	A	E	I	V	L	V	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	D	R	E	H	L	K	K	P	L	E	D	Y	M	A	L	F	P	S	V	R	I	L
Template Known Secondary structure					S	S																	S		G	G	G										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S				G	G	G	T								T	T	S	T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.																						.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	G	L	A	K	G	L	G	H	A	V	L	C	A	H	P	V	V	G	D	E	P	V	A	V	I	L	P	D	V	I	L	D	E	Y	E	S	D	L	S	Q	D	N	L	A	E	M	I	R	R	F	D	E	T	G	H	S	Q	I	M	V	E	P	V	A	D	V	T	A	Y	G	V	V	D	C	K	G	V	E
Query Conservation
Alig confidence																																																	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.
Template Sequence		R	T	K	K	R	E	G	L	I	R	T	R	M	L	G	A	S	V	A	T	G	D	V	I	T	F	L	D	S	H	C	E	A	N	V	N	W	L	P	P	L	L	D	R	I	A	R	.	.	.	.	.	.	N	R	K	T	I	V	C	P	M	I	D	V	I	D	H	D	D	F	R	Y	E	T	Q	A	G	D	A
Template Known Secondary structure				S	S																	S	S							S	S					T	T		S										.	.	.	.	.	.		T	T												T	T	T							T	T	S	S
Template Predicted Secondary structure																																																	.	.	.	.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.							.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.									.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.																										.	.
Query SS confidence																										.	.	.	.	.	.	.	.																										.	.
Query Sequence		L	A	P	G	E	S	V	P	M	V	G	V	V	E	K	P	K	A	D	V	A	P	S	N	.	.	.	.	.	.	.	.	L	A	I	V	G	R	Y	V	L	S	A	D	I	W	P	L	L	A	K	T	P	P	G	A	G	.	.	D	E	I	Q	L	T	D	A	I	D	M	L	I	E	K	E	T	V	E	A	Y
Query Conservation																										.	.	.	.	.	.	.	.																										.	.
Alig confidence																										.	.	.	.	.	.	.	.																										.	.
Template Conservation
Template Sequence		M	R	G	A	F	D	W	E	M	Y	Y	K	R	I	P	I	P	P	E	L	Q	K	A	D	P	S	D	P	F	E	S	P	V	M	A	G	G	L	F	A	V	D	R	K	W	F	W	E	L	G	G	Y	D	P	G	L	E	I	W	G	G	E	Q	Y	E	I	S	F	K	V	W	M	C	G	G	R	M	E	D	I
Template Known Secondary structure								T	T										T	T	T			S	S	T	T	S					S	S			S	S	S											T	T	S	S		T	T			S	S	S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		258
Predicted Secondary structure
Query SS confidence
Query Sequence		H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		364

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions