Job Description P0AEP3 Confidence 100.00% Date Thu Jan 5 11:23:50 GMT 2012 Rank 13 Aligned Residues 243 % Identity 22% Template c1yp3C_ PDB info PDB header:transferase Chain: C: PDB Molecule:glucose-1-phosphate adenylyltransferase small PDBTitle: crystal structure of potato tuber adp-glucose2 pyrophosphorylase in complex with atp Resolution 2.60 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		A	V	I	P	V	A	G	L	G	T	R	M	L	P	A	T	K	A	I	P	K	E	M	L	P	L	.	V	D	K	P	L	I	Q	Y	V	V	N	E	C	I	A	A	G	I	T	E	I	V	L	V	T	H	S	S	K	N	S	I	E	N	H	F	D	T	S	F	E	L	E	A	M	L	E	K	R	V	K	R	Q
Query Conservation																												.
Alig confidence																												.
Template Conservation
Template Sequence		G	I	I	L	G	G	G	A	G	T	R	L	Y	P	L	T	K	K	R	A	K	P	A	V	P	L	G	A	N	Y	R	L	I	D	I	P	V	S	N	C	L	N	S	N	I	S	K	I	Y	V	L	T	Q	F	N	S	A	S	L	N	R	H	L	S	R	A	Y	A	S	E	G	F	V	E	V	L	A	A	Q	Q
Template Known Secondary structure								S	S		T	T	S	T	T	T	T	T	T	S		G	G	G	S			T	T	T			T	T										T	T									S	S																								S	S
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		L	L	D	E	V	Q	S	I	C	P	P	H	V	T	I	M	Q	V	R	Q	G	L	A	K	G	L	G	H	A	V	L	C	A	H	P	V	V	G	D	E	P	.	.	.	V	A	V	I	L	P	D	V	I	L	D	E	Y	E	S	D	L	S	Q	D	N	L	A	E	M	I	R	R	F	D	E	T	G	H	S	Q
Query Conservation																																											.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.																								.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	E	N	P	D	W	F	Q	G	T	A	D	A	V	R	Q	Y	L	W	L	F	E	E	H	T	V	L	E	Y	L	I	L	A	G	D	H	L	Y	R	M	D	Y	E	K	F	I	Q	A	H	R	E	.	.	.	.	.	.	.	T	D	A	D	I	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S			S	S																T	T	S			S							S	S																	.	.	.	.	.	.	.	T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.	.
Template SS confidence
																	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.								.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210																				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure											.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	M	V	E	P	V	A	D	V	.	.	T	A	Y	G	V	V	D	C	K	G	V	E	L	A	P	G	E	S	V	P	M	V	G	V	V	E	K	P	K	A	D	V	A	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	A	I	V	G	R	Y	V	L	S	A	D	I	W
Query Conservation											.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.													.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.
Template Sequence		V	A	A	L	P	M	D	E	K	R	A	T	A	F	G	L	M	K	I	D	E	E	G	.	.	.	.	.	.	.	R	I	I	E	F	A	E	K	P	Q	G	E	Q	L	Q	A	M	K	V	D	T	T	I	L	G	L	D	D	K	R	A	K	E	M	P	F	I	A	S	M	G	I	Y	V	I	S	K	D	V	M
Template Known Secondary structure													T	T	S							T	T		.	.	.	.	.	.	.	B							S								T	T				G	G	G	G	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190								.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		P	L	L	A	K	T	P	P	G	A	G	D	E	I	Q	L	T	D	A	I	D	M	L	I	E	K	E	.	T	V	E	A	Y	H	M	K	G	K	S	H	D	C	G	N	K	L	G	Y	M	Q	A	F	V	E	Y	G	I	R	H
Query Conservation																													.
Alig confidence																.													.
Template Conservation																.
Template Sequence		L	N	L	L	R	D	K	F	P	G	A	N	D	F	.	G	S	E	V	I	P	G	A	T	S	L	G	M	R	V	Q	A	Y	L	Y	D	G	Y	W	E	D	I	G	T	I	E	A	F	Y	N	A	N	L	G	I	T	K	K	P
Template Known Secondary structure							T	T		T	T				T	.	T	T	T							T	T	T										S						S	S										G	G	G		S	S
Template Predicted Secondary structure																.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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