Job Description P0A9H1 Confidence 99.45% Date Thu Jan 5 11:10:11 GMT 2012 Rank 10 Aligned Residues 138 % Identity 21% Template d1oe4a_ SCOP info Uracil-DNA glycosylase-like Uracil-DNA glycosylase-like Single-strand selective monofunctional uracil-DNA glycosylase SMUG1 Resolution 2.0

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.																																				.	.	.	.		.	.	.	40	.	.	.	.	.	.	.
Predicted Secondary structure																					.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Query SS confidence																					.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Query Sequence		I	L	A	P	G	L	R	V	V	F	C	G	I	N	P	G	L	S	S	.	A	G	T	G	F	P	F	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	N	R	.	F	W	K	V	I	Y	Q	A	G	F	T
Query Conservation																					.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Alig confidence																					.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Template Conservation
Template Sequence		Y	C	K	S	K	K	E	V	L	F	L	G	M	N	P	G	P	F	G	M	A	Q	T	G	V	P	F	G	E	V	N	H	V	R	D	W	L	Q	I	E	G	P	V	S	K	P	E	V	E	H	P	K	R	R	I	R	G	F	E	C	P	Q	S	E	V	S	G	A	R	F	W	S	L	F	K	S	L	C	G	Q
Template Known Secondary structure				S	S			S						S	S			T	T	T					S	S	T	T									T	T										S	S			T	T	S				G	G	G			S																	S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.										.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																												.	.													.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.													.	.	.	.	.	.	.	.	.
Query Sequence		D	R	Q	L	K	P	Q	E	A	Q	H	L	L	D	Y	R	C	G	V	T	K	L	V	D	R	P	.	.	T	V	Q	A	N	E	V	S	K	Q	E	L	.	.	.	.	.	.	.	.	.	H	A	G	G	R	K	L	I	E	K	I	E	D	Y	Q	P	Q	A	L	A	I	L	G	K	Q	A	Y	E	Q	G	F
Query Conservation																												.	.													.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.													.	.													.	.	.	.	.	.	.	.	.																															.
Template Conservation							.	.	.	.	.	.	.	.	.																																																																		.
Template Sequence		P	E	T	F	F	.	.	.	.	.	.	.	.	.	K	H	C	F	V	H	N	H	C	P	L	I	F	M	N	H	S	G	K	N	L	T	P	T	D	L	P	K	A	Q	R	D	T	L	L	E	I	C	D	E	A	L	C	Q	A	V	R	V	L	G	V	K	L	V	I	G	V	G	R	F	S	E	Q	R	A	.
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	T	T						S								T	T						G	G	G	S																								T		S						S								.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.																																																																		.
Template SS confidence
		163	.	.	.	.										.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		S	Q	R	G	A	Q	W	G	K	Q	T	L	T	I	G	S	T	Q	I	W	V	L	P	N	P	S	G	L	.	.	.	S	R	V	S	L	E	K	L	V	E	A	Y	R	E
Query Conservation																														.	.	.
Alig confidence		.	.	.	.	.										.														.	.	.
Template Conservation		.	.	.	.	.										.
Template Sequence		.	.	.	.	.	R	K	A	L	M	A	E	G	I	.	D	V	T	V	K	G	I	M	H	P	S	P	R	N	P	Q	A	N	K	G	W	E	G	I	V	R	G	Q	L	L
Template Known Secondary structure		.	.	.	.	.							T	T		.	S											T	T		G	G	G	T	T	T
Template Predicted Secondary structure		.	.	.	.	.										.
Template SS confidence
							233	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions