Job Description P0A9H1 Confidence 95.79% Date Thu Jan 5 11:10:11 GMT 2012 Rank 12 Aligned Residues 152 % Identity 16% Template c3cxmA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:uracil-dna glycosylase; PDBTitle: leishmania naiffi uracil-dna glycosylase in complex with 5-bromouracil Resolution 1.50 Å

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		8	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.									.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure														.																		.	.	.	.	.	.	.	.
Query SS confidence														.																		.	.	.	.	.	.	.	.
Query Sequence		P	G	L	R	V	V	F	C	G	I	N	P	.	G	L	S	S	A	G	T	G	F	P	F	A	H	P	A	N	R	.	.	.	.	.	.	.	.	F	W	K	V	I	Y	Q	A	G	F	T	D	R	Q	L	K	P	Q	E	A	Q	H	L	L	D	Y	R	C	G	V	T	K	L	V	D	R	P	T	V	Q	A	N
Query Conservation														.																		.	.	.	.	.	.	.	.
Alig confidence														.																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	G	L	K	V	V	L	L	G	Q	D	P	Y	H	D	L	H	Q	A	H	G	L	C	F	S	V	L	P	E	V	P	L	P	P	S	L	R	N	I	Y	K	E	L	T	T	D	I	A	G	F	Q	A	P	K	H	G	Y	L	Q	S	W	S	E	Q	G	M	L	M	L	N	A	T	L	T	V	E	A	H	K	A
Template Known Secondary structure		T	T								S	S				S	T	T	T			S	S	T	T				T	T	S																	S	T	T					S	S								T	T	T						S	S					T	T		T
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		79	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure								.	.																			.
Query SS confidence								.	.																			.
Query Sequence		E	V	S	K	Q	E	.	.	L	H	A	G	G	R	K	L	I	E	K	I	E	D	Y	Q	P	Q	.	A	L	A	I	L	G	K	Q	A	Y	E	Q	G	F	S	Q	R	G	A	Q	W	G	K	Q	T	L	T	I	G	S	T	Q	I	W	V	L	P	N	P	S	G	L	S	R	V	S	L	E	K	L	V	E	A
Query Conservation								.	.																			.
Alig confidence								.	.																			.																							.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.
Template Sequence		N	S	H	S	K	T	S	G	W	A	A	F	T	D	A	V	I	Q	H	L	S	Q	H	H	P	N	R	L	V	F	L	L	W	G	G	Y	A	Q	Q	K	K	R	L	I	D	A	N	R	H	.	.	.	.	.	.	.	.	.	V	V	L	E	N	V	H	P	S	P	L	S	A	N	R	G	W	F	G	C	R	C
Template Known Secondary structure		T	T	T	T	T	T	S																		S	S								S					G	G	G	G	G	S		T	T	T	S	.	.	.	.	.	.	.	.	.								S	S					T	T	T	T	T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.										.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	E	L	D	Q	A	L	V	V	R	G	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	S	A	C	N	E	A	L	Q	R	M	S	H
Template Known Secondary structure												T	T
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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