Job Description P0A9H1 Confidence 100.00% Date Thu Jan 5 11:10:11 GMT 2012 Rank 3 Aligned Residues 167 % Identity 32% Template c2rbaB_ PDB info PDB header:hydrolase/dna Chain: B: PDB Molecule:g/t mismatch-specific thymine dna glycosylase; PDBTitle: structure of human thymine dna glycosylase bound to abasic and2 undamaged dna Resolution 2.79 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		V	E	D	I	L	A	P	G	L	R	V	V	F	C	G	I	N	P	G	L	S	S	A	G	T	G	F	P	F	A	H	P	A	N	R	F	W	K	V	I	Y	Q	A	G	F	T	D	R	Q	L	K	P	Q	E	A	Q	H	L	L	.	D	Y	R	C	G	V	T	K	L	V	D	R	P	T	V	Q	A	N	E	V
Query Conservation																																																													.
Alig confidence																																																													.
Template Conservation
Template Sequence		L	P	D	I	L	T	F	N	L	D	I	V	I	I	G	I	N	P	G	L	M	A	A	Y	K	G	H	H	Y	P	G	P	G	N	H	F	W	K	C	L	F	M	S	G	L	S	E	V	Q	L	N	H	M	D	D	H	T	L	P	G	K	Y	G	I	G	F	T	N	M	V	E	R	T	T	P	G	S	K	D	L
Template Known Secondary structure					B			S	S		S						S										T	S	S				S	S	S	S								T	T	S	S	S	S				G	G	G	G	G	G												S			S			S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.							.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150
Predicted Secondary structure																																							.	.	.	.	.	.																.	.																.	.
Query SS confidence																																							.	.	.	.	.	.																.	.																.	.
Query Sequence		S	K	Q	E	L	H	A	G	G	R	K	L	I	E	K	I	E	D	Y	Q	P	Q	A	L	A	I	L	G	K	Q	A	Y	E	Q	G	F	S	.	.	.	.	.	.	Q	R	G	A	Q	W	G	K	Q	T	L	T	I	G	S	.	.	T	Q	I	W	V	L	P	N	P	S	G	L	S	R	V	.	.	S	L	E
Query Conservation																																							.	.	.	.	.	.																.	.																.	.
Alig confidence																																							.	.	.	.	.	.																.	.																.	.
Template Conservation
Template Sequence		S	S	K	E	F	R	E	G	G	R	I	L	V	Q	K	L	Q	K	Y	Q	P	R	I	A	V	F	N	G	K	C	I	Y	E	I	F	S	K	E	V	F	G	V	K	V	K	N	L	E	F	G	L	Q	P	H	K	I	P	D	T	E	T	L	C	Y	V	M	P	S	S	S	A	R	C	A	Q	F	P	R	A	Q
Template Known Secondary structure																							S																		S						S			S								T	T	S										S	S	S	S	S	S	S			S	T	T
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		151	.	.	.	.	.	.				.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		K	L	V	E	A	Y	R	.	.	.	E	L	D	Q	A	L	V	V	R	G	R
Query Conservation									.	.	.
Alig confidence									.	.	.
Template Conservation
Template Sequence		D	K	V	H	Y	Y	I	K	L	K	D	L	R	D	Q	L	K	G	I	E	R
Template Known Secondary structure		T	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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