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Job Description | P45539 | Confidence | 1.14% | Date | Thu Jan 5 12:02:59 GMT 2012 |
Rank | 82 | Aligned Residues | 90 |
% Identity | 16% | Template | d1r3jc_ |
SCOP info | Voltage-gated potassium channels
| Voltage-gated potassium channels
| Voltage-gated potassium channels
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Resolution | 1.90 |
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350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | T | S | L | L | G | Y | F | T | L | V | M | C | F | K | N | T | L | T | F | G | S | I | I | W | C | R | K | R | D | D | Y | K | P | L | W | R | T | P | A | F | G | L | M | T | T | L | A | I | A | S | S | L | I | L | V | A | S | T | F | V | W | A | P | I | P | G | L | I | C | A | V | I | V | I | A | T | G | L | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
H | W | R | A | A | G | A | A | T | V | L | L | V | I | V | L | L | A | G | S | Y | L | A | V | L | A | E | R | G | A | P | G | A | Q | L | I | T | Y | P | R | A | L | W | W | S | V | E | T | A | . |
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T | T | V | G | Y | G | D | L | Y | P | V | T | L | W | G | R | C | V | A | V | V | V | M | V | A | G | I | T |
Template Known Secondary structure |   |
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| S |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
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. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
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430 | |
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. | . | . | . | . | . | . | . | . | 440 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | . |
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Y | A | F | W | A | K | R | S | R | Q | L | N |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | F | G | L | V | T | A | A | L | A | T | W | F | V | G | R | E | Q | E | R | R | G | H |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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