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Job DescriptionP45539
Confidence4.42%DateThu Jan 5 12:02:59 GMT 2012
Rank16Aligned Residues23
% Identity13%Templatec2rddB_
PDB info PDB header:membrane protein/transport proteinChain: B: PDB Molecule:upf0092 membrane protein yajc; PDBTitle: x-ray crystal structure of acrb in complex with a novel2 transmembrane helix.
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   420.........430.........440..
Predicted Secondary structure 



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Query Sequence  AVIVIATGLPAYAFWAKRSRQLN
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Template Sequence  ILMLVVFGLIFYFMILRPQQKRT
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   24.....30.........40......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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