Job Description P37180 Confidence 1.46% Date Thu Jan 5 11:54:55 GMT 2012 Rank 78 Aligned Residues 333 % Identity 10% Template c3lrcC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:arginine/agmatine antiporter; PDBTitle: structure of e. coli adic (p1) Resolution 4.00 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	I	I	S	K	P	V	M	I	F	G	P	L	I	V	I	C	M	L	L	I	V	K	R	L	V	F	G	L	G	S	V	S	D	L	N	G	G	F	P	W	G	V	W	I	A	F	D	L	L	I	G	T	G	F	A	C	G	G	W	A	L	A	W	A	V	Y	V	F	N	R	G	Q	Y	H	P	L	V	R
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.
Template Sequence		G	P	F	L	G	Y	Q	T	N	V	L	Y	W	L	A	C	W	I	G	N	I	A	M	V	V	I	G	V	G	Y	L	S	Y	F	F	P	I	L	K	D	P	L	V	L	T	I	.	.	.	.	.	.	.	.	.	T	C	V	V	V	L	W	I	F	V	L	L	N	I	V	G	P	K	M	I	T	R	V	Q	A
Template Known Secondary structure															T	T	T	T											T	G	G	G	S	S	S	S					S	S	S					.	.	.	.	.	.	.	.	.															S		S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.										.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	L	L	A	S	L	F	G	Y	S	L	G	G	L	S	I	T	I	D	V	G	R	Y	W	N	L	P	Y	F	Y	I	P	G	H	F	N	V	N	S	V	L	F	E	T	A	V	C	M	T	I	Y	I	G	V	M	A	L	E	F	A	P	A	L	F	E	R	L	G	W	K	V	S	L	Q	R	L	N	K	V
Query Conservation
Alig confidence																																	.	.	.																																								.	.	.	.	.	.	.
Template Conservation																																	.	.	.																																								.	.	.	.	.	.	.
Template Sequence		V	A	T	V	L	A	L	I	P	I	V	G	I	A	V	F	G	W	F	W	F	R	G	E	T	Y	M	A	A	W	N	.	.	.	V	S	G	L	G	T	F	G	A	I	Q	S	T	L	N	V	T	L	W	S	F	I	G	V	E	S	A	S	V	A	A	G	V	V	K	N	P	K	R	.	.	.	.	.	.	.
Template Known Secondary structure																					S			S	S							S	.	.	.		S	S	S						T								S	T	T		T	T	G	G	G					G	G	G	S	S	S				.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.																																								.	.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.				.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		M	F	F	I	I	A	L	G	A	L	L	P	T	M	H	Q	S	S	M	G	S	L	M	I	S	A	G	Y	K	V	H	P	L	W	Q	S	Y	E	M	L	P	L	F	S	L	L	T	A	F	I	M	G	F	S	I	V	I	F	E	G	S	L	V	Q	A	G	L	R	G	N	G	.	P	D	E	K	S	L	F	V
Query Conservation																																																																									.
Alig confidence		.	.	.																																		.																																			.
Template Conservation		.	.	.																																		.
Template Sequence		.	.	.	N	V	P	I	A	T	I	G	G	V	L	I	A	A	V	C	Y	V	L	S	T	T	A	I	M	G	M	I	P	N	T	A	G	.	A	I	V	S	F	C	A	A	A	G	C	L	G	S	L	G	G	W	T	L	L	A	G	Q	T	A	K	A	A	A	D	D	G	L	F	P	P	I	F	A	R	V	N
Template Known Secondary structure		.	.	.																					T	T				S						T		.									T																T	T	S	S	T	T	T	S	S		S
Template Predicted Secondary structure		.	.	.																																		.
Template SS confidence
					223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	T	N	T	I	S	V	L	L	A	I	F	I	V	L	R	F	G	E	L	I	Y	R	D	K	L	S	L	A	F	A	G	D	F	Y	S	V	M	F	W	I	E	V	L	L	M	L	F	P	L	V	V	L	R	V	A	K	L	R	N	D	S	R	M	L	F	L	S	A	L	S	A	L	L	G	C	A	T	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	G	T	P	V	A	G	L	I	I	V	G	I	L	M	T	I	F	Q	L	S	S	I	S	P	N	A	T	K	E	F	G	L	V	S	S	V	S	V	I	F	T	L	V	P	Y	L	Y	T	C	A	A	L	L	L	L	G	H	G	H	F	G	K	A	R	P	A	Y	L	A	V	T	T	I	A	F	L	Y	C
Template Known Secondary structure		S	S	S	S																	T	T	S	S	S		S	S	S	S	S			S	S	T	T						T	T													T		T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	T	Y	S	L	V	A	F	N	P	G	G	G	Y	A	Y	F	P	T	W	E	E	L	L	I	S	I	G	F	V	A	I	E	I	C	A	Y	I	V	L	I	R	L	L	P	I	L	P
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	W	A	V	.	.	.	.	.	.	.	.	.	.	.	.	V	G	S	G	A	K	E	V	M	W	S	F	V	T	L	M	V	I	T	A	M	Y	A	L	N	Y	N	R	L	H	K	N	P
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.		S	S																		T	T	T	S						S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		399	400	.	.													.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions