Job Description P31446 Confidence 2.65% Date Thu Jan 5 11:47:36 GMT 2012 Rank 44 Aligned Residues 46 % Identity 15% Template c2wwbA_ PDB info PDB header:ribosome Chain: A: PDB Molecule:protein transport protein sec61 subunit alpha isoform 1; PDBTitle: cryo-em structure of the mammalian sec61 complex bound to the2 actively translating wheat germ 80s ribosome Resolution 6.48 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80					.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																															.							.	.	.	.
Query SS confidence																															.							.	.	.	.
Query Sequence		D	K	T	A	E	I	K	R	G	L	L	A	G	I	K	G	E	K	I	T	T	V	E	K	K	E	D	V	D	.	V	D	K	I	L	N	.	.	.	.	Q	S	G	I	A	L	A	I	A	A	L	L	C	A	F	I	G
Query Conservation																															.							.	.	.	.
Alig confidence											.	.	.	.	.	.															.							.	.	.	.
Template Conservation											.	.	.	.	.	.
Template Sequence		D	V	A	K	Q	L	K	E	Q	.	.	.	.	.	.	Q	M	V	M	R	G	H	R	E	T	S	M	V	H	E	L	N	R	Y	I	P	T	A	A	A	F	G	G	L	C	I	G	A	L	S	V	L	A	D	F	L	G
Template Known Secondary structure											.	.	.	.	.	.		T	T	T					T	T	T	T	T
Template Predicted Secondary structure											.	.	.	.	.	.
Template SS confidence
		389	390	.	.	.	.	.	.	.							.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions