 |
Job Description | P09158 | Confidence | 90.71% | Date | Thu Jan 5 11:02:05 GMT 2012 |
Rank | 442 | Aligned Residues | 113 |
% Identity | 14% | Template | d1llca1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| LDH N-terminal domain-like
|
Resolution | 3.00 |
|
 |
  |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | |
|
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | H | G | H | A | K | H | V | L | I | I | G | G | G | . |
. |
D | G | A | M | L | R | E | V | T | R | H | K | N | V | E | S | I | T | M | V | E | I | D | A | G | V | V | S | F | C | R | Q | Y | L | P | N | H | N | A | G | S | Y | D | D | P | R | F | K | L | V | I | D | D | G | V | N | F | V | N | Q | T | S | Q |
Query Conservation |   |
  |   |   |   |   |
|   |   |
|
|
|
|
|   |
| . | . |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |
|
|   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |
| . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   | . | . | . | . | . |   |   |
|   |   |
Template Sequence |   |
I | T | D | K | D | H | Q | K | V | I | L | V | G | D | G | A | V | G | S | S | Y | A | F | A | M | V | L | Q | G | I | A | Q | E | I | G | I | V | D | I | F | K | D | K | T | K | G | D | A | I | D | L | . |
. |
. |
S | N | A | L | P | F | T | S | P | K | K | I | Y | S | A | E | . |
. |
. |
. |
. |
Y | S | D | A | K |
Template Known Secondary structure |   |
S |
|
|
|
| S |
|
|  |  |  | S |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| S | S |  |  |  |
|
| S |
| S |  |  |  |  |  |  |  |  |  |  | . | . | . | T | T | S |
| T | T | S |
|
|
|
| B |
|
|
| T | . | . | . | . | . | T | T | T | T | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
| . | . | . | . | . |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
|
. | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
|
|
|
|
. | . | . | . | . |
  |
  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | F | D | V | I | I | S | D | C | T | D | P | I | G | P | G | E | S | L | F | T | S | A | F | Y | E | G | C | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
R | C | L | N | P | G | G | I | F | V | A | Q | N | G | V | C |
Query Conservation |   |
  |
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |
|   |
|   |
|
|   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   | . |
|
|   |   |
|
|
|
Template Sequence |   |
D | A | D | L | V | V | I | T | A | G | A | P | K | Q | P | G | E | T | . |
R | L | D | L | V | N | K | N | L | K | I | L | K | S | I | V | D | P | I | V | D | S | G | F | N | L | I | . |
F | L | V | A | A | N | P |
Template Known Secondary structure |   |
S |
| S |  |  |  |
| B | T |
|
|
| S | S |
| S | S | S | . |
| S | T |  |  |  |  | T | T | S | T | T | T | T | T | T |  |  |  |  |  | T | T |
|
| S |  | . |  |  |
| B |
| S | S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  | . |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | |
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | |
. | . | . | . | . | 140 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|