Job Description P09158 Confidence 92.74% Date Thu Jan 5 11:02:05 GMT 2012 Rank 398 Aligned Residues 116 % Identity 11% Template c8ldhA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:m4 apo-lactate dehydrogenase; PDBTitle: refined crystal structure of dogfish m4 apo-lactate2 dehydrogenase Resolution 2.80 Å

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		72	.	.	.	.	.	.	.				80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure										.	.	.									.	.
Query SS confidence										.	.	.									.	.
Query Sequence		L	L	A	H	G	H	A	K	.	.	.	H	V	L	I	I	G	G	G	.	.	D	G	A	M	L	R	E	V	T	R	H	K	N	V	E	S	I	T	M	V	E	I	D	A	G	V	V	S	F	C	R	Q	Y	L	P	N	H	N	A	G	S	Y	D	D	P	R	F	K	L	V	I	D	D	G	V	N	F	V	N
Query Conservation										.	.	.									.	.
Alig confidence										.	.	.									.	.																																			.	.																						.	.
Template Conservation																																																									.	.																						.	.
Template Sequence		L	A	T	S	Q	E	P	R	S	Y	N	K	I	T	V	V	G	V	G	A	V	G	M	A	C	A	I	S	I	L	M	K	D	L	A	D	E	V	A	L	V	D	V	M	E	D	K	L	K	G	E	M	M	D	L	.	.	Q	H	G	S	L	F	L	H	T	A	K	I	V	S	G	K	D	Y	S	V	S	.	.
Template Known Secondary structure			S								S	S								S												T	T	T			S							S													.	.			T	G	G	G										S	S	G	G	G	G	.	.
Template Predicted Secondary structure																																																									.	.																						.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.						.	170	.	.	.	.	.	.	.	.	.	180	.	.	.				.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.																.	.	.
Query SS confidence																								.	.	.	.	.																.	.	.
Query Sequence		Q	T	S	Q	T	F	D	V	I	I	S	D	C	T	D	P	I	G	P	G	E	S	.	.	.	.	.	L	F	T	S	A	F	Y	E	G	C	K	R	C	L	N	.	.	.	P	G	G	I	F	V	A	Q	N	G	V	C
Query Conservation																								.	.	.	.	.																.	.	.
Alig confidence		.	.	.																				.	.	.	.	.																.	.	.					.
Template Conservation		.	.	.																																															.
Template Sequence		.	.	.	A	G	S	K	L	V	V	I	T	A	G	A	R	Q	Q	E	G	E	S	R	L	N	L	V	Q	R	N	V	N	I	F	K	F	I	I	P	N	I	V	K	H	S	P	D	C	I	.	I	L	V	V	S	N	P
Template Known Secondary structure		.	.	.	T	T		S												T	T																										T	T			.					S	S	S
Template Predicted Secondary structure		.	.	.																																															.
Template SS confidence
					87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions