Job Description P09158 Confidence 97.29% Date Thu Jan 5 11:02:05 GMT 2012 Rank 293 Aligned Residues 156 % Identity 16% Template c3s1sA_ PDB info PDB header:hydrolase, transferase Chain: A: PDB Molecule:restriction endonuclease bpusi; PDBTitle: characterization and crystal structure of the type iig restriction2 endonuclease bpusi Resolution 2.35 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																						.	.	.																								.
Query SS confidence																																						.	.	.																								.
Query Sequence		E	M	M	T	H	V	P	L	L	A	H	G	H	A	K	H	V	L	I	I	G	G	G	D	G	A	M	L	R	E	V	T	R	H	K	N	.	.	.	V	E	S	I	T	M	V	E	I	D	A	G	V	V	S	F	C	R	Q	Y	L	P	N	.	H	N	A	G	S	Y	D	D	P	R	F	K	L	V	I	D	D
Query Conservation																																						.	.	.																								.
Alig confidence																																						.	.	.																								.
Template Conservation
Template Sequence		I	I	S	Q	H	I	L	G	R	P	L	T	E	D	E	V	I	S	D	P	A	A	G	S	G	N	L	L	A	T	V	S	A	G	F	N	N	V	X	P	R	Q	I	W	A	N	D	I	E	T	L	F	L	E	L	L	S	I	R	L	G	L	L	F	P	Q	L	V	S	S	N	N	A	P	T	I	T	G	E	D
Template Known Secondary structure										S				T	T						T	T		T	T	S									T	S	T	T			G	G	G						S		G	G	G										T	T	S	T	T	T		B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.																					.	.	.	.	170	.	.	.						.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Query Sequence		G	V	N	F	V	N	Q	T	S	Q	T	F	D	V	I	I	S	D	C	T	D	P	I	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	S	L	F	T	S	A	.	.	.	.	.	F	Y	E	G	C	K	R	C	L	N	P	G	G	I	F	V	A	Q	N	G	V	C
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template Conservation
Template Sequence		V	C	S	L	N	P	E	D	F	A	N	V	S	V	V	V	X	N	P	P	Y	V	S	G	V	T	D	P	A	I	K	R	K	F	A	H	K	I	I	Q	L	T	G	N	R	P	Q	T	L	F	G	Q	I	G	V	E	A	L	F	L	E	L	V	T	E	L	V	Q	D	G	T	V	I	S	A	I	X	P	K	Q
Template Known Secondary structure		G	G	G			G	G	G	G	T	T									B			S	S																			S	S			S	S		S	S	S															S		T	T									T
Template Predicted Secondary structure
Template SS confidence
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
		196	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		F	L	Q	Q	E	E	.	.	A	I	D	S	H	R	K	L	S	H	Y	F	S	D	V	G	F	Y	Q
Query Conservation								.	.
Alig confidence								.	.
Template Conservation
Template Sequence		Y	L	T	A	Q	G	N	E	S	K	A	F	R	E	F	L	V	G	N	F	G	L	E	H	I	F	L
Template Known Secondary structure							S											T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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