Job Description P09158 Confidence 98.44% Date Thu Jan 5 11:02:05 GMT 2012 Rank 245 Aligned Residues 121 % Identity 18% Template c3pvcA_ PDB info PDB header:oxidoreductase, transferase Chain: A: PDB Molecule:trna 5-methylaminomethyl-2-thiouridine biosynthesis PDBTitle: crystal structure of apo mnmc from yersinia pestis Resolution 2.31 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.													100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.																			.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.										.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.										.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	V	L	I	I	G	G	G	D	G	A	M	L	R	E	V	T	R	H	K	.	.	.	.	.	.	.	.	.	.	.	.	N	V	E	S	I	T	M	V	E	.	.	.	I	D	A	G	V	V	S	F	C	R	Q	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	H	N	A
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.										.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.										.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	F	A	E	T	G	F	G	T	G	L	N	F	L	T	L	W	R	D	F	A	L	F	R	Q	Q	S	P	N	A	T	L	R	R	L	H	Y	I	S	F	E	K	Y	P	L	H	V	A	D	L	A	S	A	H	A	R	W	P	E	L	A	S	F	A	E	Q	L	R	A	Q	W	P	L	P	L	A	G	C	H	R
Template Known Secondary structure									T	T	S																		T	T	S	S											S	S												T	T		G	G	G										T						S
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		127	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.					.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure										.	.																		.	.	.	.
Query SS confidence										.	.																		.	.	.	.
Query Sequence		G	S	Y	D	D	P	R	F	.	.	K	L	V	I	D	D	G	V	N	F	V	N	Q	T	S	Q	T	.	.	.	.	F	D	V	I	I	S	D	C	T	D	P	I	G	P	G	E	S	L	F	T	S	A	F	Y	E	G	C	K	R	C	L	N	P	G	G	I	F	V	A	Q	N	G	V	C	F	L	Q	Q	E
Query Conservation										.	.																		.	.	.	.
Alig confidence										.	.																		.	.	.	.												.	.	.																										.	.	.	.	.
Template Conservation																																												.	.	.																										.	.	.	.	.
Template Sequence		I	L	L	A	D	G	A	I	T	L	D	L	W	F	G	D	V	N	T	L	L	P	T	L	D	D	S	L	N	N	Q	V	D	A	W	F	L	D	G	F	A	P	.	.	.	N	P	D	X	W	N	E	Q	L	F	N	A	X	A	R	X	T	R	P	G	G	T	F	S	T	.	.	.	.	.	F	T	A	A	G
Template Known Secondary structure					T	T	T	T								S						G	G	G			G	G	G	T	T									S	S			.	.	.			T	T		S																				.	.	.	.	.	S
Template Predicted Secondary structure																																												.	.	.																										.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.						.	.	210	.	.
		201	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	I	D	S	H	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	R	R	G	L	Q	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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