Return to main results Retrieve Phyre Job Id

Job DescriptionP09158
Confidence99.02%DateThu Jan 5 11:02:05 GMT 2012
Rank135Aligned Residues125
% Identity7%Templatec3p2kA_
PDB info PDB header:transferaseChain: A: PDB Molecule:16s rrna methylase; PDBTitle: structure of an antibiotic related methyltransferase
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   70.........80.........90.........100.........110.........120.........130.........140.........
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  VPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTS
Query Conservation    
     
  




 
 
      
       
  



  

  
   
         
 

 
   

   
    
Alig confidence 



















































.


























Template Conservation     
       






 
     

   
   
 


 
      
   
.          

     
   

    
Template Sequence  LTEIIGQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKI. IKKPSKGGLSNVVFVIAAAESLPFELK
Template Known Secondary structure  TSST
TTS
TT
S
GGGG.TS
GGGT

SS


TTS

GGGT
Template Predicted Secondary structure 

















.












Template SS confidence 















































































   17..20.........30.........40.........50.........60........ .70.........80.........90.....
 
   150.........160..... ....170.........180.........190.....
Predicted Secondary structure 










.










Query SS confidence 















.





























Query Sequence  QTFDVIISDCTDPIGP. GESLFTSAFYEGCKRCLNPGGIFVAQNGVC
Query Conservation    

 

 
       .   
 
 

       
 
 

 
      
Alig confidence 















.





























Template Conservation     
 
          
         
    
 
 


 
       
Template Sequence  NIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYK
Template Known Secondary structure  T
S

TT
T


Template Predicted Secondary structure 
















Template SS confidence 














































   96...100.........110.........120.........130.........140..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions