Return to main results Retrieve Phyre Job Id

Job DescriptionP09158
Confidence99.25%DateThu Jan 5 11:02:05 GMT 2012
Rank64Aligned Residues106
% Identity14%Templatec3mtiA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rrna methylase; PDBTitle: the crystal structure of a rrna methylase from streptococcus2 thermophilus to 1.95a
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80.........90.........100.........110.........120.........130.........140.........150.....
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI
Query Conservation    
  




 
 
      
       
  



  

  
   
         
 

 
   

   
      

 
Alig confidence 






















..




















.....




























Template Conservation    
  


 
 
 
  
  

  ..   
  

 
   
  
    .....                          
 
Template Sequence  DDESIVVDATXGNGNDTAFLAGL. . SKKVYAFDVQEQALGKTSQRL. . . . . SDLGIENTELILDGHENLDHYVREPIRAA
Template Known Secondary structure 
TT
S

TTSTT..SSS
.....T


S
GGGGGGT

S
Template Predicted Secondary structure 










..




.....

















Template SS confidence 















































































   18.20.........30.........40 .........50.........60. ........70.........80.........90
 
   156...160.........170.........180.........190....
Predicted Secondary structure 
















Query SS confidence 






































Query Sequence  ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV
Query Conservation 
 
          
 
 

       
 
 

 
     
Alig confidence 









......






















Template Conservation 
  
      ......   
      




 
 
    
Template Sequence  IFNLGKPHTT. . . . . . LEAIEKILDRLEVGGRLAIXIYD
Template Known Secondary structure 

......

Template Predicted Secondary structure 




......






Template SS confidence 






































   91........100 .........110.........120...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions