Job Description P09158 Confidence 99.07% Date Thu Jan 5 11:02:05 GMT 2012 Rank 122 Aligned Residues 144 % Identity 11% Template c3e23A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein rpa2492; PDBTitle: crystal structure of the rpa2492 protein in complex with2 sam from rhodopseudomonas palustris, northeast structural3 genomics consortium target rpr299 Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	A	K	H	V	L	I	I	G	G	G	D	G	A	M	L	R	E	V	T	R	H	K	N	V	E	S	I	T	M	V	E	I	D	A	G	V	V	S	F	C	R	Q	Y	L	P	N	H	N	A	G	S	Y	D	D	P	R	F	K	L	V	I	D	D	G	V	N	F	V	N	Q	T	S	Q	T	F	D	V	I
Query Conservation
Alig confidence																											.	.																				.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																											.	.																				.	.	.	.	.	.	.	.	.	.	.													.	.
Template Sequence		P	A	G	A	K	I	L	E	L	G	C	G	A	G	Y	Q	A	E	A	X	L	A	A	G	F	.	.	D	V	D	A	T	D	G	S	P	E	L	A	A	E	A	S	R	R	L	.	.	.	.	.	.	.	.	.	.	.	G	R	P	V	R	T	X	L	F	H	Q	L	.	.	D	A	I	D	A	Y	D	A	V
Template Known Secondary structure			T	T						S	S		T	T	S									T	T		.	.							S													.	.	.	.	.	.	.	.	.	.	.	T	S							G	G	G		.	.				S
Template Predicted Secondary structure																											.	.																				.	.	.	.	.	.	.	.	.	.	.													.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.												.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.														.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	S	D	C	T	D	P	I	G	P	G	E	S	L	F	T	S	A	F	Y	E	G	C	K	R	C	L	N	P	G	G	I	F	V	A	Q	N	G	V	C	.	.	.	.	.	.	.	.	.	.	.	.	.	F	L	Q	Q	E	E	A	I	D	S	H	R	K	L	S	H	Y	F	S	D	V	G	F	Y	Q	A	A
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation																.	.																																																					.	.
Template Sequence		W	A	H	A	C	L	L	H	V	P	R	D	E	L	.	.	A	D	V	L	K	L	I	W	R	A	L	K	P	G	G	L	F	Y	A	S	Y	K	S	G	E	G	E	G	R	D	K	L	A	R	Y	Y	N	Y	P	S	E	E	W	L	R	A	R	Y	A	E	A	G	.	.	T	W	A	S	V	A	V	E	S	S
Template Known Secondary structure					S		G	G	G	S						.	.																									S	S					T	T	S																				.	.			S
Template Predicted Secondary structure																.	.																																																					.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.
		223	.	.	.	.	.	.	230				.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		I	P	T	Y	Y	G	G	I	.	.	.	M	T	F	A	W	A	T	D
Query Conservation										.	.	.
Alig confidence										.	.	.
Template Conservation
Template Sequence		E	G	K	G	F	D	Q	E	L	A	Q	F	L	H	V	S	V	R	K
Template Known Secondary structure						T	T	S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions