Job Description P09158 Confidence 99.45% Date Thu Jan 5 11:02:05 GMT 2012 Rank 26 Aligned Residues 181 % Identity 15% Template c3c0kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:upf0064 protein yccw; PDBTitle: crystal structure of a ribosomal rna methyltranferase Resolution 2.00 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	V	D	N	V	L	Y	H	E	K	T	D	H	Q	D	L	I	I	F	E	N	A	A	F	G	R	V	M	A	L	D	G	V	V	Q	T	T	E	R	D	E	F	I	Y	H	E	M	M	T	H	V	P	L	L	A	H	G	H	A	K	H	V	L	I	I	G	G	G	D	G	A	M	L	R	E	V	T	R	H
Query Conservation
Alig confidence																								.	.	.								.	.																																														.
Template Conservation																								.	.	.								.	.																																														.
Template Sequence		X	E	L	T	Q	G	P	V	T	G	E	L	P	P	A	L	L	P	I	E	E	H	.	.	.	G	X	K	L	L	V	D	.	.	I	Q	H	G	H	K	T	G	Y	Y	L	D	Q	R	D	S	R	L	A	T	R	R	Y	V	E	N	K	R	V	L	N	C	F	S	Y	T	G	G	F	A	V	S	A	L	X	.
Template Known Secondary structure											S					S	S						T	.	.	.	T							.	.	T	T	T	S	S	T	T	S	S		G	G	G												T	T							T		T	T	T									.
Template Predicted Secondary structure																								.	.	.								.	.																																														.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																																			.	.	.																									.	.	.	.
Query SS confidence																																																			.	.	.																									.	.	.	.
Query Sequence		K	N	V	E	S	I	T	M	V	E	I	D	A	G	V	V	S	F	C	R	Q	Y	L	P	N	H	N	A	G	S	Y	D	D	P	R	F	K	L	V	I	D	D	G	V	N	F	V	N	Q	.	.	.	T	S	Q	T	F	D	V	I	I	S	D	C	T	D	P	I	G	P	G	E	S	L	F	T	.	.	.	.
Query Conservation																																																			.	.	.																									.	.	.	.
Alig confidence																											.	.	.																						.	.	.																									.	.	.	.
Template Conservation																											.	.	.
Template Sequence		G	G	C	S	Q	V	V	S	V	D	T	S	Q	E	A	L	D	I	A	R	Q	N	V	E	L	.	.	.	N	K	L	D	L	S	K	A	E	F	V	R	D	D	V	F	K	L	L	R	T	Y	R	D	R	G	E	K	F	D	V	I	V	X	D	P	P	K	F	V	E	N	K	S	Q	L	X	G	A	C	R	G
Template Known Secondary structure		T	T		S							S															.	.	.	T	T			G	G	G						S												T	T											S	S		S	S	T	T		S	S	S				T
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.				.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
			172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	S	A	F	Y	E	G	C	K	R	C	L	N	P	G	G	I	F	V	A	Q	N	G	V	C	F	L	Q	Q	E	E	A	I	D	S	H	R	K
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		Y	K	D	I	N	X	L	A	I	Q	L	L	N	E	G	G	I	L	L	T	F	S	C	S	G	L	X	T	S	D	L	F	Q	K	I	I	A	D
Template Known Secondary structure												T														T	T
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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