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Job DescriptionP09158
Confidence100.00%DateThu Jan 5 11:02:05 GMT 2012
Rank12Aligned Residues255
% Identity96%Templatec3adnB_
PDB info PDB header:transferaseChain: B: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of spermidine synthase from e. coli.
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  QWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIG
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Template Sequence  QWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIG
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   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  GGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGP
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Template Sequence  GGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIVN. . . . . . QTSQTFDVIISDCTSA. . .
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   86...90.........100.........110.........120.........130.........140 .........150......
 
   166...170.........180.........190.........200.........210.........220.........230.........240.....
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Query Sequence  GESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDNDALRHL
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Template Sequence  . . . . . . . . FYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDNDALRH.
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   174.....180.........190.........200.........210.........220.........230.........240....
 
   246...250.........260.........270.........280..
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Query Sequence  STEIIQARFLASGLKCRYYNPAIHTAAFALPQYLQDA
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Template Sequence  . . . . LSTEIIQARLKCRYYNPAIHTAAFALPQYLQDA
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   245....250.........260.........270.......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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