Job Description P09158 Confidence 97.96% Date Thu Jan 5 11:02:05 GMT 2012 Rank 278 Aligned Residues 135 % Identity 15% Template c2vs1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:uncharacterized rna methyltransferase pyrab10780; PDBTitle: the crystal structure of pyrococcus abyssi trna (uracil-54,2 c5)-methyltransferase in complex with s-adenosyl-l-3 homocysteine Resolution 2.1 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	M	T	H	V	P	L	L	A	H	G	H	A	K	H	V	L	I	I	G	G	G	D	G	A	M	L	R	E	V	T	R	H	K	N	V	E	S	I	T	M	V	E	I	D	A	G	V	V	S	F	C	R	Q	Y	L	P	N	H	N	A	G	S	Y	D	D	P	R	F	K	L	V	I	D	D	G	V	N	F
Query Conservation
Alig confidence														.																						.	.																						.	.	.	.	.															.	.	.	.
Template Conservation														.																						.	.																						.	.	.	.	.															.	.	.	.
Template Sequence		V	N	L	V	R	K	V	S	E	L	V	E	.	G	E	K	I	L	D	M	Y	S	G	V	G	T	F	G	I	Y	L	A	K	R	.	.	G	F	N	V	K	G	F	D	S	N	E	F	A	I	E	M	A	R	R	N	V	.	.	.	.	.	E	I	N	N	V	D	A	E	F	E	V	A	S	D	.	.	.	.
Template Known Secondary structure														.	S	S						T		T	T	T								T	T	.	.	T								S													.	.	.	.	.			T	T										T	.	.	.	.
Template Predicted Secondary structure														.																						.	.																						.	.	.	.	.															.	.	.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.						.	.	.	.	.	.	.	320	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	Q	T	S	Q	T	F	D	V	I	I	S	D	C	T	D	P	I	G	P	G	E	S	L	F	T	S	A	F	Y	E	G	C	K	R	C	L	N	P	G	G	I	F	V	A	Q	N	G	V	C	F	L	Q	Q	E	E	A	I	D	S	H	R	K	L	S	H	Y	F	S	D	V	G	F	Y	Q	A	A	I	P
Query Conservation
Alig confidence																	.	.	.	.	.	.																	.									.	.	.			.	.													.	.	.	.
Template Conservation																	.	.	.	.	.	.																	.									.	.	.			.	.													.	.	.	.
Template Sequence		R	E	V	S	V	K	G	F	D	T	V	I	V	D	P	.	.	.	.	.	.	P	R	A	G	L	H	P	R	L	V	K	R	L	N	R	E	.	K	P	G	V	I	V	Y	V	.	.	.	S	C	.	.	N	P	E	T	F	A	R	D	V	K	M	L	.	.	.	.	D	Y	R	I	D	E	I	V	A	L	D
Template Known Secondary structure		T	T				T	T		S							.	.	.	.	.	.		T	T		S												.			S						.	.	.		S	.	.												T	.	.	.	.	T
Template Predicted Secondary structure																	.	.	.	.	.	.																	.									.	.	.			.	.													.	.	.	.
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.							.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.				.	.			.	.	370	.	.	.	.	.	.	.	.	.					380	.	.	.	.	.	.	.	.	.	390
		225	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	F	P
Template Known Secondary structure			S	T
Template Predicted Secondary structure
Template SS confidence
		391	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions